Lariza María de la Caridad Portuondo-Mallet, Niurka Mollineda-Diogo, Rubén Orozco-Morales, Juan Valentín Lorenzo-Ginori
{"title":"Detection and counting of <i>Leishmania</i> intracellular parasites in microscopy images.","authors":"Lariza María de la Caridad Portuondo-Mallet, Niurka Mollineda-Diogo, Rubén Orozco-Morales, Juan Valentín Lorenzo-Ginori","doi":"10.3389/fmedt.2024.1360280","DOIUrl":null,"url":null,"abstract":"<p><strong>Problem: </strong>Leishmaniasis is a disease caused by protozoan parasites of the genus <i>Leishmania</i> and has a high prevalence and impact on global health. Currently, the available drugs for its treatment have drawbacks, such as high toxicity, resistance of the parasite, and high cost. Therefore, the search for new, more effective, and safe drugs is a priority. The effectiveness of an anti-leishmanial drug is analyzed through <i>in vitro</i> studies in which a technician manually counts the intracellular form of the parasite (amastigote) within macrophages, which is slow, laborious, and prone to errors.</p><p><strong>Objectives: </strong>To develop a computational system that facilitates the detection and counting of amastigotes in microscopy images obtained from <i>in vitro</i> studies using image processing techniques.</p><p><strong>Methodology: </strong>Segmentation of objects in the microscope image that might be <i>Leishmania</i> amastigotes was performed using the multilevel Otsu method on the saturation component of the <i>hue, saturation, and intensity</i> color model. In addition, morphological operations and the watershed transform combined with the weighted external distance transform were used to separate clustered objects. Then positive (amastigote) objects were detected (and consequently counted) using a classifier algorithm, the selection of which as well as the definition of the features to be used were also part of this research. MATLAB was used for the development of the system.</p><p><strong>Results and discussion: </strong>The results were evaluated in terms of sensitivity, precision, and the F-measure and suggested a favorable effectiveness of the proposed method.</p><p><strong>Conclusions: </strong>This system can help researchers by allowing large volumes of images of amastigotes to be counted using an automatic image analysis technique.</p>","PeriodicalId":94015,"journal":{"name":"Frontiers in medical technology","volume":"6 ","pages":"1360280"},"PeriodicalIF":2.7000,"publicationDate":"2024-08-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11377220/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Frontiers in medical technology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.3389/fmedt.2024.1360280","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/1/1 0:00:00","PubModel":"eCollection","JCR":"Q3","JCRName":"ENGINEERING, BIOMEDICAL","Score":null,"Total":0}
引用次数: 0
Abstract
Problem: Leishmaniasis is a disease caused by protozoan parasites of the genus Leishmania and has a high prevalence and impact on global health. Currently, the available drugs for its treatment have drawbacks, such as high toxicity, resistance of the parasite, and high cost. Therefore, the search for new, more effective, and safe drugs is a priority. The effectiveness of an anti-leishmanial drug is analyzed through in vitro studies in which a technician manually counts the intracellular form of the parasite (amastigote) within macrophages, which is slow, laborious, and prone to errors.
Objectives: To develop a computational system that facilitates the detection and counting of amastigotes in microscopy images obtained from in vitro studies using image processing techniques.
Methodology: Segmentation of objects in the microscope image that might be Leishmania amastigotes was performed using the multilevel Otsu method on the saturation component of the hue, saturation, and intensity color model. In addition, morphological operations and the watershed transform combined with the weighted external distance transform were used to separate clustered objects. Then positive (amastigote) objects were detected (and consequently counted) using a classifier algorithm, the selection of which as well as the definition of the features to be used were also part of this research. MATLAB was used for the development of the system.
Results and discussion: The results were evaluated in terms of sensitivity, precision, and the F-measure and suggested a favorable effectiveness of the proposed method.
Conclusions: This system can help researchers by allowing large volumes of images of amastigotes to be counted using an automatic image analysis technique.
问题:利什曼病是由利什曼属原生动物寄生虫引起的一种疾病,发病率很高,对全球健康影响很大。目前,现有的治疗药物存在毒性大、寄生虫抗药性强、成本高昂等缺点。因此,寻找更有效、更安全的新药是当务之急。抗利什曼病药物的有效性是通过体外研究来分析的,在体外研究中,技术人员手动计数巨噬细胞内寄生虫(变形虫)的细胞内形式,这种方法缓慢、费力且容易出错:目的:开发一个计算系统,利用图像处理技术,帮助在体外研究获得的显微镜图像中检测和计数变形虫:方法:使用色调、饱和度和强度色彩模型中饱和度分量的多级大津法,对显微镜图像中可能是利什曼原虫的物体进行分割。此外,还使用形态学运算和分水岭变换结合加权外距离变换来分离聚类对象。然后使用分类器算法检测(并因此计数)阳性(非原虫)对象,该算法的选择和所用特征的定义也是本研究的一部分。系统的开发使用了 MATLAB:从灵敏度、精确度和 F 测量方面对结果进行了评估,结果表明所提议的方法非常有效:该系统可以帮助研究人员利用自动图像分析技术对大量非主流图像进行计数。