Differential Proteomic Profiling at Different Phases of Dengue Infection: An Intricate Insight from Proteins to Pathogenesis

IF 3.8 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS Journal of Proteome Research Pub Date : 2024-08-12 DOI:10.1021/acs.jproteome.3c0075110.1021/acs.jproteome.3c00751
Kamalika Roy Choudhury, Priya Verma, Aleepta Guha Ray, Sandip Samanta, Asish Manna, Arun Bandyopadhyay, Shanta Dutta and Provash C. Sadhukhan*, 
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Abstract

Dengue fever is a rapidly emerging tropical disease and an important cause of morbidity in its severe form worldwide. A wide spectrum of the pathophysiology is associated with the transition of dengue fever to severe dengue, which is driven by the host immune response and might reflect in patients’ proteome profile. This study aims to analyze the plasma from different phases of dengue-infected patients at two time points. A mass-spectrometry-based proteomic approach was utilized to understand the involvement of probable candidate proteins toward developing a more severe, hemorrhagic form of dengue fever. Dengue-infected hospital-admitted patients with <5 days of fever were included in this study. Patient samples from the acute phase were screened for the presence of NS1 antigen using ELISA and subjected to molecular serotyping. Dengue molecular serotype-confirmed patient samples, pairwise from acute and critical phases with healthy control were subjected to qualitative and quantitative proteomic analysis, and then pathway analysis was performed. The protein–protein interaction network between the dengue virus and host proteins was depicted in the search for proteins associated with severe dengue pathophysiology. An array of apolipoprotein, cytokines, and endothelial proteins in association with virus replication and endothelial dysfunction were validated as biomolecules involved in severe dengue pathophysiology.

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登革热感染不同阶段的差异蛋白质组分析:从蛋白质到发病机制的复杂视角
登革热是一种迅速出现的热带疾病,也是全球严重登革热发病率的重要原因。登革热向重症登革热的转变与多种病理生理学因素有关,这些因素由宿主免疫反应驱动,并可能反映在患者的蛋白质组图谱中。本研究旨在分析两个时间点登革热感染者不同阶段的血浆。利用基于质谱分析的蛋白质组学方法,了解可能的候选蛋白质对登革热更严重的出血性发展的参与情况。本研究纳入了发烧 5 天的登革热住院患者。用酶联免疫吸附法检测急性期患者样本中是否存在 NS1 抗原,并进行分子血清分型。对急性期和危重期登革热分子血清型确诊患者样本与健康对照组样本进行定性和定量蛋白质组分析,然后进行通路分析。在寻找与严重登革热病理生理学相关的蛋白质时,描绘了登革热病毒与宿主蛋白质之间的蛋白质相互作用网络。一系列与病毒复制和内皮功能障碍有关的载脂蛋白、细胞因子和内皮蛋白被确认为参与严重登革热病理生理学的生物大分子。
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来源期刊
Journal of Proteome Research
Journal of Proteome Research 生物-生化研究方法
CiteScore
9.00
自引率
4.50%
发文量
251
审稿时长
3 months
期刊介绍: Journal of Proteome Research publishes content encompassing all aspects of global protein analysis and function, including the dynamic aspects of genomics, spatio-temporal proteomics, metabonomics and metabolomics, clinical and agricultural proteomics, as well as advances in methodology including bioinformatics. The theme and emphasis is on a multidisciplinary approach to the life sciences through the synergy between the different types of "omics".
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