Propene-bridged cyanurate tetramers decorated on carbon nanosheets with antibacterial activity: insights from molecular modeling and in vitro studies†

Omnarayan Agrawal, Hitesh Kumar Sharma, Radhika Chaurasia, Gaganjyot Kaur Bakshi, Aakanksha Agarwal, Mousumi Sen, Praveen Mamidala, R. K. Dey, Mukesh Chourasia and Monalisa Mukherjee
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Abstract

The increasing antibiotic resistance owing to the limitations of current antibiotics accentuates the imperative need for a trailblazing antibacterial therapy. Their unique physicochemical attributes make propene-bridged cyanurate tetramers decorated on carbon nanosheets (CNHs) promising materials for biomedical applications. In this study, we synthesized CNHs using cyanuric acid as the dopant and glycerol and sulphuric acid as the precursors and investigated their antibacterial activity against prominent bacterial strains, Escherichia coli and Staphylococcus aureus. By conducting in vitro experiments, we assessed the antibacterial efficacy of these materials. Additionally, by performing in silico molecular docking analysis, we unraveled the intricate interactions between CNH materials and their targets in bacterial cells. These studies confirmed the profound antibacterial effectiveness of CNHs against both the bacterial strains. In addition, molecular dynamics simulation of total 3 μs revealed the interaction of CNHs with the enzymes GlmU of E. coli and MurE of S. aureus, which are responsible for bacterial cell wall synthesis, resulting in the inhibition of bacterial growth. These findings manifest the potential of the CNH as a promising antibacterial agent. The unique physicochemical properties of the CNH, coupled with antibacterial activity, substantiate their promising roles across an expansive array of biomedical applications, prominently inclining towards the combat against debilitating bacterial infections.

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具有抗菌活性的碳纳米片上装饰的丙烯桥接氰尿酸四聚体:分子建模和体外研究的启示†。
由于现有抗生素的局限性,抗生素耐药性不断增加,因此迫切需要一种开创性的抗菌疗法。碳纳米片上装饰的丙烯桥氰尿酸四聚体(CNHs)具有独特的物理化学特性,是一种很有前景的生物医学应用材料。在本研究中,我们以三聚氰酸为掺杂剂,甘油和硫酸为前体合成了 CNHs,并研究了它们对大肠杆菌和金黄色葡萄球菌等主要细菌菌株的抗菌活性。通过体外实验,我们评估了这些材料的抗菌功效。此外,通过进行硅学分子对接分析,我们揭示了 CNH 材料与其在细菌细胞中的靶标之间错综复杂的相互作用。这些研究证实了 CNHs 对两种细菌菌株都有很好的抗菌效果。此外,总计 3 μs 的分子动力学模拟揭示了 CNHs 与大肠杆菌的 GlmU 和金黄色葡萄球菌的 MurE(负责细菌细胞壁合成)的相互作用,从而抑制了细菌的生长。这些发现表明 CNH 具有作为抗菌剂的潜力。CNH 的独特理化特性加上抗菌活性,使其在生物医学领域的广泛应用中大有可为,特别是在抗击使人衰弱的细菌感染方面。
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