Ideotype map research based on a crop model in the context of a climatic gradient

IF 2.6 3区 环境科学与生态学 Q2 ECOLOGY Ecological Modelling Pub Date : 2024-09-12 DOI:10.1016/j.ecolmodel.2024.110840
Diariétou Sambakhé , Eric Gozé , Jean-Noël Bacro , Michael Dingkuhn , Myriam Adam , Malick Ndiaye , Bertrand Muller , Lauriane Rouan
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Abstract

Due to increasing climate uncertainties, optimizing plant traits is essential for sustainable agriculture. This article presents an approach that combines advanced modelling techniques to identify optimal plant traits under various agro-environmental conditions. By integrating a crop model, a climate generator, and our PEQI algorithm (Profile Expected Quantile Improvement), our method aims to create ideotype maps tailored to specific regions.

We use the SAMARA model (Simulator of crop trait Assembly, MAnagement Response, and Adaptation), calibrated with trials carried in Sahel on a set of local varieties, to simulate crop growth in diverse environments. The PEQI algorithm adjusts varietal parameters to maximize expected yield, defining precise selection objectives known as ideotypes, which are particularly important in regions with irregular rainfall patterns like the Sahel.

With the PEQI algorithm based on a kriging metamodel, we ensure effective adaptation to spatially variable environments. By leveraging a climate generator to simulate meteorological variability, our integrated approach optimizes crop yields in regions such as Senegal, southern Mali, Burkina Faso, and Guinea-Bissau. The outcome is an ideotype map for sorghum, providing breeders with a robust decision-support tool to enhance crop performance amidst climate uncertainty.

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基于气候梯度背景下作物模型的表型图研究
由于气候的不确定性日益增加,优化植物性状对可持续农业至关重要。本文介绍了一种结合先进建模技术来识别各种农业环境条件下最优植物性状的方法。通过整合作物模型、气候生成器和 PEQI 算法(Profile Expected Quantile Improvement),我们的方法旨在创建适合特定地区的表型图。我们使用 SAMARA 模型(作物性状组装、管理响应和适应模拟器),通过在萨赫勒地区对一组当地品种进行试验校准,模拟作物在不同环境下的生长。PEQI 算法会调整品种参数,使预期产量最大化,从而确定精确的选择目标(称为表意型),这对于像萨赫勒这样降雨模式不规则的地区尤为重要。通过利用气候发生器模拟气象变异,我们的综合方法优化了塞内加尔、马里南部、布基纳法索和几内亚比绍等地区的作物产量。我们的成果是高粱表意型图,为育种者提供了一个强大的决策支持工具,在气候不确定的情况下提高作物产量。
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来源期刊
Ecological Modelling
Ecological Modelling 环境科学-生态学
CiteScore
5.60
自引率
6.50%
发文量
259
审稿时长
69 days
期刊介绍: The journal is concerned with the use of mathematical models and systems analysis for the description of ecological processes and for the sustainable management of resources. Human activity and well-being are dependent on and integrated with the functioning of ecosystems and the services they provide. We aim to understand these basic ecosystem functions using mathematical and conceptual modelling, systems analysis, thermodynamics, computer simulations, and ecological theory. This leads to a preference for process-based models embedded in theory with explicit causative agents as opposed to strictly statistical or correlative descriptions. These modelling methods can be applied to a wide spectrum of issues ranging from basic ecology to human ecology to socio-ecological systems. The journal welcomes research articles, short communications, review articles, letters to the editor, book reviews, and other communications. The journal also supports the activities of the [International Society of Ecological Modelling (ISEM)](http://www.isemna.org/).
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