{"title":"Comparative chloroplast genome analysis of tribe Jasmineae (Oleaceae, Lamiales)","authors":"Thi Thanh Nga Le, Hoang Dang Khoa Do","doi":"10.1007/s40415-024-01040-9","DOIUrl":null,"url":null,"abstract":"<p><i>Jasminum</i> L.<i>,</i> a genus of <i>Oleaceae</i>, contains different species that are often used in medicinal and industrial fields. Genomic data of <i>Jasminum</i> are essential for elucidating the evolutionary history and mining DNA-based applications. Therefore, in this study, the complete chloroplast genomes of <i>Jasminum nervosum</i> Lour. and <i>Jasminum multiflorum</i> (Burm.f.) Andrews were sequenced and characterized based on the next-generation sequencing method. Consequently, typical quadripartite chloroplast genomes of 162,855 bp and 163,248 bp were completed for <i>J. multiflorum</i> and <i>J. nervosum,</i> respectively. Comparative genomic analysis among chloroplast genomes of tribe <i>Jasmineae</i> revealed different numbers of repeats, inversion of <i>pafI-pafII</i> region, loss of <i>accD</i>, and loss of <i>clpP</i> introns. Phylogenetic analysis revealed the monophyly of five tribes of <i>Oleaceae</i>. <i>J. nervosum</i> was closely related to <i>J. multiflorum</i> formed compared to other <i>Jasminum</i> taxa. The newly completed chloroplast genomes of <i>Jasminum</i> species enlarged the genomic data and provided useful information for further studies on genomic evolution, population genetics, and phylogeny of <i>Oleaceae</i>.</p>","PeriodicalId":9140,"journal":{"name":"Brazilian Journal of Botany","volume":null,"pages":null},"PeriodicalIF":1.4000,"publicationDate":"2024-09-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Brazilian Journal of Botany","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1007/s40415-024-01040-9","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"PLANT SCIENCES","Score":null,"Total":0}
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Abstract
Jasminum L., a genus of Oleaceae, contains different species that are often used in medicinal and industrial fields. Genomic data of Jasminum are essential for elucidating the evolutionary history and mining DNA-based applications. Therefore, in this study, the complete chloroplast genomes of Jasminum nervosum Lour. and Jasminum multiflorum (Burm.f.) Andrews were sequenced and characterized based on the next-generation sequencing method. Consequently, typical quadripartite chloroplast genomes of 162,855 bp and 163,248 bp were completed for J. multiflorum and J. nervosum, respectively. Comparative genomic analysis among chloroplast genomes of tribe Jasmineae revealed different numbers of repeats, inversion of pafI-pafII region, loss of accD, and loss of clpP introns. Phylogenetic analysis revealed the monophyly of five tribes of Oleaceae. J. nervosum was closely related to J. multiflorum formed compared to other Jasminum taxa. The newly completed chloroplast genomes of Jasminum species enlarged the genomic data and provided useful information for further studies on genomic evolution, population genetics, and phylogeny of Oleaceae.
期刊介绍：
The Brazilian Journal of Botany is an international journal devoted to publishing a wide-range of research in plant sciences: biogeography, cytogenetics, ecology, economic botany, physiology and biochemistry, morphology and anatomy, molecular biology and diversity phycology, mycology, palynology, and systematics and phylogeny.
The journal considers for publications original articles, short communications, reviews, and letters to the editor.
Manuscripts describing new taxa based on morphological data only are suitable for submission; however information from multiple sources, such as ultrastructure, phytochemistry and molecular evidence are desirable.
Floristic inventories and checklists should include new and relevant information on other aspects, such as conservation strategies and biogeographic patterns.
The journal does not consider for publication submissions dealing exclusively with methods and protocols (including micropropagation) and biological activity of extracts with no detailed chemical analysis.
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