Expression Characteristics of CsPAE55 in Citrus and Analysis of Its Interacting Protein

IF 1.6 4区 生物学 Q4 BIOCHEMICAL RESEARCH METHODS Plant Molecular Biology Reporter Pub Date : 2024-08-24 DOI:10.1007/s11105-024-01493-y
Qing He, Zihao Liu, Xiao He
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Abstract

Exploring the resistance genes of citrus to Huanglongbing (HLB) is the foundation and key to disease resistance breeding. Based on comparative genomic transcriptome data, four pectin acetylesterase (PAE) genes responsive to Candidatus liberibacter asiaticus (CaLas) infection induction were screened, and a gene cloned with higher differential expression levels was identified, named CsPAE55. Bioinformatics analyses showed that CsPAE55 was conserved but had sequence differences compared with homologs. The subcellular localization results of tobacco indicated that CsPAE55 protein was mainly localized in the nucleus and cytoplasm. RT-qPCR analysis showed that the expression of CsPAE55 was related to variety tolerance, tissue site, and symptom development. In addition, we established virus vector-mediated infection systems in citrus, namely gene silencing systems mediated by virus-induced gene silencing (VIGS) and gene overexpression systems mediated by citrus leaf blotch virus (CLBV), and obtained CsPAE55 silencing and overexpression plants. And we established a stable transformation system mediated by Agrobacterium rhizogenes in citrus and obtained CsPAE55 silencing and overexpression citrus hairy roots. The analysis of hormone content and gene expression in CsPAE55 plants also indicated that overexpression of CsPAE55 regulated the transcriptional regulation of genes involved in systemic acquired resistance (SAR) response. Using Protein–Protein Interaction (PPI) to predict and screen for a citrus protein CsARF1 that may interact with CsPAE55, and preliminarily verifying its interaction with CsPAE55 protein through Yeast Two-hybrid (Y2H) and Bimolecular Fluorescent Complimentary (BIFC). In summary, our data provided theoretical basis and genetic resources for subsequent molecular breeding of citrus resistance to HLB disease.

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柑橘中 CsPAE55 的表达特征及其相互作用蛋白的分析
探索柑橘对黄龙病(HLB)的抗性基因是抗病育种的基础和关键。基于基因组转录组比较数据,筛选出了四个对Candidatus liberibacter asiaticus(CaLas)感染诱导有响应的果胶乙酰酯酶(PAE)基因,并确定了一个克隆的差异表达水平较高的基因,命名为CsPAE55。生物信息学分析表明,CsPAE55具有保守性,但与同源基因相比存在序列差异。烟草亚细胞定位结果表明,CsPAE55 蛋白主要定位于细胞核和细胞质。RT-qPCR 分析表明,CsPAE55 的表达与品种耐受性、组织部位和症状发展有关。此外,我们还建立了病毒载体介导的柑橘感染系统,即以病毒诱导基因沉默(VIGS)为介导的基因沉默系统和以柑橘叶斑病病毒(CLBV)为介导的基因过表达系统,并获得了CsPAE55沉默和过表达植株。并建立了以根瘤农杆菌为介导的柑橘稳定转化系统,获得了CsPAE55沉默和过表达的柑橘毛根。对CsPAE55植株中激素含量和基因表达的分析也表明,CsPAE55的过表达调控了参与系统获得性抗性(SAR)反应的基因的转录调控。利用蛋白-蛋白相互作用(PPI)预测和筛选出可能与CsPAE55相互作用的柑橘蛋白CsARF1,并通过酵母双杂交(Y2H)和双分子荧光共振(BIFC)初步验证了其与CsPAE55蛋白的相互作用。总之,我们的数据为后续柑橘抗 HLB 病的分子育种提供了理论依据和遗传资源。
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来源期刊
Plant Molecular Biology Reporter
Plant Molecular Biology Reporter 生物-生化研究方法
CiteScore
4.20
自引率
0.00%
发文量
40
审稿时长
2.7 months
期刊介绍: The scope of the journal of Plant Molecular Biology Reporter has expanded to keep pace with new developments in molecular biology and the broad area of genomics. The journal now solicits papers covering myriad breakthrough technologies and discoveries in molecular biology, genomics, proteomics, metabolomics, and other ‘omics’, as well as bioinformatics.
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