Therapeutic Potential of Colchicum luteum Against Flagellin (FliC) in Salmonella typhimurium: An In silico Approach

IF 1.2 4区 医学 Q4 CHEMISTRY, MEDICINAL Letters in Drug Design & Discovery Pub Date : 2024-08-29 DOI:10.2174/0115701808334616240822055800
Mohammed Naveez Valathoor, Subhashree Venugopal
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Abstract

Background and Objectives:: Salmonella typhimurium is a foodborne pathogen that is a major concern for global health. Flagellin (FliC) is an essential protein in Salmonella typhimurium for both motility and virulence and is a key component of flagella. Hence, focusing on FliC protein is a promising strategy for developing new anti-Salmonella agents. Colchicum luteum, a medicinal plant, shows promising antimicrobial properties. Thus, this study explores the therapeutic potential of Colchicum luteum against FliC protein using computational methods in comparison to the standard antibiotic ciprofloxacin. Methods: Molecular docking simulation was performed to evaluate the binding affinity and interaction pattern of bioactive compounds present in Colchicum luteum and ciprofloxacin against FliC protein. This study also analysed protein stability and dynamics studies of the apoprotein, ciprofloxacin, kesselringine, and gloriosine complexes using molecular dynamic (MD) simulation. The MMGBSA method computed binding free energies Results: Through docking simulations, it was found that gloriosine and kesselringine have strong binding affinity with FliC protein, similar to ciprofloxacin. MD simulation showed consistent protein- ligand complexes during the entire simulation. The MMGBSA analysis confirmed the positive interactions observed in the docking results, showing binding free energies similar to ciprofloxacin. Conclusion: This study suggests that the phytocompound of Colchicum luteum shows promise as a source for creating anti-Salmonella typhimurium agents that target FliC protein. These results suggest that Colchicum luteum may have therapeutic potential against Salmonella typhimurium infections and should be further studied through in vitro and in vivo experiments.
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秋水仙对鼠伤寒沙门氏菌中旗菌素 (FliC) 的治疗潜力:硅学方法
背景和目标::鼠伤寒沙门氏菌(Salmonella typhimurium)是一种食源性病原体,是全球健康的一个主要问题。鞭毛蛋白(FliC)是鼠伤寒沙门氏菌运动和毒力所必需的蛋白质,也是鞭毛的关键组成部分。因此,关注 FliC 蛋白是开发新的抗沙门氏菌药物的一种有前途的策略。药用植物 Colchicum luteum 具有良好的抗菌特性。因此,与标准抗生素环丙沙星相比,本研究利用计算方法探讨了黄连对 FliC 蛋白的治疗潜力。研究方法进行了分子对接模拟,以评估黄连和环丙沙星中的生物活性化合物与 FliC 蛋白的结合亲和力和相互作用模式。该研究还利用分子动力学(MD)模拟分析了载脂蛋白、环丙沙星、凯瑟林碱和格罗瑞辛复合物的蛋白质稳定性和动力学研究。MMGBSA 方法计算了结合自由能:通过对接模拟发现,格罗瑞辛和凯瑟林碱与 FliC 蛋白有很强的结合亲和力,与环丙沙星相似。在整个模拟过程中,MD 模拟显示了一致的蛋白质配体复合物。MMGBSA 分析证实了对接结果中观察到的正相互作用,显示出与环丙沙星相似的结合自由能。结论这项研究表明,黄连的植物化合物有望成为针对 FliC 蛋白的抗鼠伤寒沙门氏菌药物的来源。这些结果表明,秋水仙黄体可能具有治疗鼠伤寒沙门氏菌感染的潜力,应通过体外和体内实验进行进一步研究。
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来源期刊
CiteScore
1.80
自引率
10.00%
发文量
245
审稿时长
3 months
期刊介绍: Aims & Scope Letters in Drug Design & Discovery publishes letters, mini-reviews, highlights and guest edited thematic issues in all areas of rational drug design and discovery including medicinal chemistry, in-silico drug design, combinatorial chemistry, high-throughput screening, drug targets, and structure-activity relationships. The emphasis is on publishing quality papers very rapidly by taking full advantage of latest Internet technology for both submission and review of manuscripts. The online journal is an essential reading to all pharmaceutical scientists involved in research in drug design and discovery.
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