One-Sided Matching Portal (OSMP): a tool to facilitate rare disease patient matchmaking

Matthew Osmond, E. Magda Price, Orion J. Buske, Mackenzie Frew, Madeline Couse, Taila Hartley, Conor Klamann, Hannah G. B. H. Le, Jenny Xu, Delvin So, Anjali Jain, Kevin Lu, Kevin Mo, Hannah Wyllie, Erika Wall, Hannah G. Driver, Warren A. Cheung, Ana S.A. Cohen, Emily G. Farrow, Isabelle Thiffault, Care4Rare Canada Consortium, Andrei L. Turinsky, Tomi Pastinen, Michael Brudno, Kym M. Boycott
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Abstract

Background Genomic matchmaking - the process of identifying multiple individuals with overlapping phenotypes and rare variants in the same gene - is an important tool facilitating gene discoveries for unsolved rare genetic disease (RGD) patients. Current approaches are two-sided, meaning both patients being matched must have the same candidate gene flagged. This limits the number of unsolved RGD patients eligible for matchmaking. A one-sided approach to matchmaking, in which a gene of interest is queried directly in the genome-wide sequencing data of RGD patients, would make matchmaking possible for previously undiscoverable individuals. However, platforms and workflows for this approach have not been well established.
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单方配对门户网站 (OSMP):促进罕见病患者配对的工具
背景 基因组配对--识别具有重叠表型和同一基因罕见变异的多个个体的过程--是促进未解决罕见遗传病(RGD)患者基因发现的重要工具。目前的方法是双面的,这意味着配对的两个患者必须标记相同的候选基因。这就限制了符合配对条件的未解决 RGD 患者的数量。如果采用单侧匹配方法,即直接在 RGD 患者的全基因组测序数据中查询感兴趣的基因,就有可能为以前无法发现的个体进行匹配。然而,这种方法的平台和工作流程还没有很好地建立起来。
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