Exact computation of Transfer Entropy with Path Weight Sampling

Avishek Das, Pieter Rein ten Wolde
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Abstract

Information processing in networks entails a dynamical transfer of information between stochastic variables. Transfer entropy is widely used for quantification of the directional transfer of information between input and output trajectories. However, currently there is no exact technique to quantify transfer entropy given the dynamical model of a general network. Here we introduce an exact computational algorithm, Transfer Entropy-Path Weight Sampling (TE-PWS), to quantify transfer entropy and its variants in an arbitrary network in the presence of multiple hidden variables, nonlinearity, transient conditions, and feedback. TE-PWS extends a recently introduced algorithm Path Weight Sampling (PWS) and uses techniques from the statistical physics of polymers and trajectory sampling. We apply TE-PWS to linear and nonlinear systems to reveal how transfer entropy can overcome naive applications of data processing inequalities in presence of feedback.
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利用路径权重采样精确计算转移熵
网络中的信息处理需要随机变量之间的动态信息传递。转移熵被广泛用于量化输入和输出轨迹之间的定向信息转移。然而,目前还没有精确的技术来量化一般网络动态模型中的转移熵。在这里,我们引入了一种精确的计算算法--转移熵-路径权重采样(TE-PWS),在存在多个隐变量、非线性、瞬态条件和反馈的情况下,量化任意网络中的转移熵及其变体。TE-PWS 扩展了最近推出的算法路径权重采样(PWS),并使用了聚合物统计物理学和轨迹采样技术。我们将 TE-PWS 应用于线性和非线性系统,揭示了在存在反馈的情况下,传递熵如何克服数据处理不等式的天真应用。
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