Torque Teno Sus Virus 1: A Potential Surrogate Pathogen to Study Pig-Transmitted Transboundary Animal Diseases

Viruses Pub Date : 2024-08-31 DOI:10.3390/v16091397
Xiaolong Li, Brandon M. Parker, Raoul K. Boughton, James C. Beasley, Timothy J. Smyser, James D. Austin, Kim M. Pepin, Ryan S. Miller, Kurt C. Vercauteren, Samantha M. Wisely
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Abstract

Understanding the epidemiology and transmission dynamics of transboundary animal diseases (TADs) among wild pigs (Sus scrofa) will aid in preventing the introduction or containment of TADs among wild populations. Given the challenges associated with studying TADs in free-ranging populations, a surrogate pathogen system may predict how pathogens may circulate and be maintained within wild free-ranging swine populations, how they may spill over into domestic populations, and how management actions may impact transmission. We assessed the suitability of Torque teno sus virus 1 (TTSuV1) to serve as a surrogate pathogen for molecular epidemiological studies in wild pigs by investigating the prevalence, persistence, correlation with host health status and genetic variability at two study areas: Archbold’s Buck Island Ranch in Florida and Savannah River Site in South Carolina. We then conducted a molecular epidemiological case study within Archbold’s Buck Island Ranch site to determine how analysis of this pathogen could inform transmission dynamics of a directly transmitted virus. Prevalence was high in both study areas (40%, n = 190), and phylogenetic analyses revealed high levels of genetic variability within and between study areas. Our case study showed that pairwise host relatedness and geographic distance were highly correlated to pairwise viral genetic similarity. Molecular epidemiological analyses revealed a distinct pattern of direct transmission from pig to pig occurring within and between family groups. Our results suggest that TTSuV1 is highly suitable for molecular epidemiological analyses and will be useful for future studies of transmission dynamics in wild free-ranging pigs.
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托克-特诺-苏氏病毒 1:研究猪传播跨界动物疾病的潜在替代病原体
了解跨境动物疾病(TADs)在野猪(Sus scrofa)中的流行病学和传播动态将有助于防止或遏制 TADs 在野生种群中的传播。鉴于在散养种群中研究 TADs 所面临的挑战,替代病原体系统可以预测病原体如何在野生散养猪种群中循环和维持,如何溢出到家养种群中,以及管理措施如何影响传播。我们在两个研究区域调查了Torque teno sus病毒1(TTSuV1)的流行率、持续性、与宿主健康状况的相关性以及遗传变异性,从而评估了TTSuV1是否适合作为野猪分子流行病学研究的替代病原体:在佛罗里达州的阿奇博尔德巴克岛牧场和南卡罗来纳州的萨凡纳河遗址。然后,我们在 Archbold 的巴克岛牧场进行了分子流行病学案例研究,以确定对这种病原体的分析如何为直接传播病毒的传播动态提供信息。两个研究区的流行率都很高(40%,n = 190),系统发生学分析表明研究区内和研究区之间的遗传变异水平很高。我们的案例研究表明,成对宿主亲缘关系和地理距离与成对病毒基因相似性高度相关。分子流行病学分析表明,猪与猪之间的直接传播模式在家庭群体内部和之间发生。我们的研究结果表明,TTSuV1非常适合进行分子流行病学分析,并将有助于今后对野生放养猪的传播动态进行研究。
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