Joint segmentation and image reconstruction with error prediction in photoacoustic imaging using deep learning

IF 7.1 1区 医学 Q1 ENGINEERING, BIOMEDICAL Photoacoustics Pub Date : 2024-09-11 DOI:10.1016/j.pacs.2024.100645
Ruibo Shang , Geoffrey P. Luke , Matthew O’Donnell
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引用次数: 0

Abstract

Deep learning has been used to improve photoacoustic (PA) image reconstruction. One major challenge is that errors cannot be quantified to validate predictions when ground truth is unknown. Validation is key to quantitative applications, especially using limited-bandwidth ultrasonic linear detector arrays. Here, we propose a hybrid Bayesian convolutional neural network (Hybrid-BCNN) to jointly predict PA image and segmentation with error (uncertainty) predictions. Each output pixel represents a probability distribution where error can be quantified. The Hybrid-BCNN was trained with simulated PA data and applied to both simulations and experiments. Due to the sparsity of PA images, segmentation focuses Hybrid-BCNN on minimizing the loss function in regions with PA signals for better predictions. The results show that accurate PA segmentations and images are obtained, and error predictions are highly statistically correlated to actual errors. To leverage error predictions, confidence processing created PA images above a specific confidence level.

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利用深度学习在光声成像中进行带误差预测的联合分割和图像重建
深度学习已被用于改进光声(PA)图像重建。一个主要挑战是,在地面实况未知的情况下,无法量化误差以验证预测结果。验证是定量应用的关键,尤其是使用有限带宽的超声线性探测器阵列。在此,我们提出了一种混合贝叶斯卷积神经网络(Hybrid-BCNN),用于联合预测 PA 图像和带误差(不确定性)预测的分割。每个输出像素代表一个概率分布,其中的误差可以量化。混合混杂网络通过模拟 PA 数据进行训练,并应用于模拟和实验。由于 PA 图像的稀疏性,Hybrid-BCNN 的分割重点是最小化 PA 信号区域的损失函数,以获得更好的预测。结果表明,可以获得准确的 PA 分割和图像,并且误差预测与实际误差在统计学上高度相关。为了充分利用误差预测,置信度处理创建了高于特定置信度的 PA 图像。
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来源期刊
Photoacoustics
Photoacoustics Physics and Astronomy-Atomic and Molecular Physics, and Optics
CiteScore
11.40
自引率
16.50%
发文量
96
审稿时长
53 days
期刊介绍: The open access Photoacoustics journal (PACS) aims to publish original research and review contributions in the field of photoacoustics-optoacoustics-thermoacoustics. This field utilizes acoustical and ultrasonic phenomena excited by electromagnetic radiation for the detection, visualization, and characterization of various materials and biological tissues, including living organisms. Recent advancements in laser technologies, ultrasound detection approaches, inverse theory, and fast reconstruction algorithms have greatly supported the rapid progress in this field. The unique contrast provided by molecular absorption in photoacoustic-optoacoustic-thermoacoustic methods has allowed for addressing unmet biological and medical needs such as pre-clinical research, clinical imaging of vasculature, tissue and disease physiology, drug efficacy, surgery guidance, and therapy monitoring. Applications of this field encompass a wide range of medical imaging and sensing applications, including cancer, vascular diseases, brain neurophysiology, ophthalmology, and diabetes. Moreover, photoacoustics-optoacoustics-thermoacoustics is a multidisciplinary field, with contributions from chemistry and nanotechnology, where novel materials such as biodegradable nanoparticles, organic dyes, targeted agents, theranostic probes, and genetically expressed markers are being actively developed. These advanced materials have significantly improved the signal-to-noise ratio and tissue contrast in photoacoustic methods.
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