QTL mapping for wheat ferulic acid concentration using 50 K SNP chip in a recombinant inbred line population of Zhongmai 578/Jimai 22

IF 2.2 4区农林科学 Q3 CHEMISTRY, APPLIED Cereal Chemistry Pub Date : 2024-09-16 DOI:10.1002/cche.10835

Rabiu Sani Shawai, Wenfei Tian, Siyang Liu, Xue Gong, Jindong Liu, Shuanghe Cao, Yong Zhang, Zhonghu He

{"title":"QTL mapping for wheat ferulic acid concentration using 50 K SNP chip in a recombinant inbred line population of Zhongmai 578/Jimai 22","authors":"Rabiu Sani Shawai, Wenfei Tian, Siyang Liu, Xue Gong, Jindong Liu, Shuanghe Cao, Yong Zhang, Zhonghu He","doi":"10.1002/cche.10835","DOIUrl":null,"url":null,"abstract":"<div>\n \n \n <section>\n \n <h3> Background and Objectives</h3>\n \n <p>Ferulic acid is a prominent bioactive compound found in wheat grains, known for its beneficial health effects, prompting significant interest from breeders and producers. The aim of this study was to identify new quantitative trait loci (QTL) to aid in the development of wheat varieties with increased ferulic acid concentration (FAC).</p>\n </section>\n \n <section>\n \n <h3> Findings</h3>\n \n <p>In this study, a recombinant inbred line population, resulting from a cross between Zhongmai 578 and Jimai 22, was evaluated in five different environments. Genotyping was performed using the wheat 50 K single-nucleotide polymorphism (SNP) array. Three stable QTL, named <i>QFAC.caas-2D</i>, <i>QFAC.caas-3B</i>, and <i>QFAC.caas-4D</i>, were identified. These QTL explained 4.24%–7.09%, 3.7%–4.57%, and 3.20%–5.06% of the phenotypic variances, respectively. Furthermore, three SNPs closely associated with above QTL were successfully converted into kompetitive allele-specific polymerase chain reaction (KASP) markers.</p>\n </section>\n \n <section>\n \n <h3> Conclusions</h3>\n \n <p>FAC is a complex trait governed by multiple minor-effect QTL. The successful development of KASP markers opens up avenues for marker-assisted selection in breeding programs.</p>\n </section>\n \n <section>\n \n <h3> Significance and Novelty</h3>\n \n <p>This study establishes a genetic foundation for understanding the genetic basis of FAC in wheat. The identified QTL and developed KASP markers offer valuable insights for quality breeding initiatives and the production of functional wheat-based foods.</p>\n </section>\n </div>","PeriodicalId":9807,"journal":{"name":"Cereal Chemistry","volume":"101 6","pages":"1345-1353"},"PeriodicalIF":2.2000,"publicationDate":"2024-09-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Cereal Chemistry","FirstCategoryId":"97","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/cche.10835","RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"CHEMISTRY, APPLIED","Score":null,"Total":0}

引用次数: 0

Abstract

Background and Objectives

Ferulic acid is a prominent bioactive compound found in wheat grains, known for its beneficial health effects, prompting significant interest from breeders and producers. The aim of this study was to identify new quantitative trait loci (QTL) to aid in the development of wheat varieties with increased ferulic acid concentration (FAC).

Findings

In this study, a recombinant inbred line population, resulting from a cross between Zhongmai 578 and Jimai 22, was evaluated in five different environments. Genotyping was performed using the wheat 50 K single-nucleotide polymorphism (SNP) array. Three stable QTL, named QFAC.caas-2D, QFAC.caas-3B, and QFAC.caas-4D, were identified. These QTL explained 4.24%–7.09%, 3.7%–4.57%, and 3.20%–5.06% of the phenotypic variances, respectively. Furthermore, three SNPs closely associated with above QTL were successfully converted into kompetitive allele-specific polymerase chain reaction (KASP) markers.

Conclusions

FAC is a complex trait governed by multiple minor-effect QTL. The successful development of KASP markers opens up avenues for marker-assisted selection in breeding programs.

Significance and Novelty

This study establishes a genetic foundation for understanding the genetic basis of FAC in wheat. The identified QTL and developed KASP markers offer valuable insights for quality breeding initiatives and the production of functional wheat-based foods.

查看原文

微信好友朋友圈 QQ好友复制链接

本刊更多论文

利用 50 K SNP 芯片在中麦 578/Jimai 22 重组近交系群体中绘制小麦阿魏酸浓度 QTL 图谱

阿魏酸是小麦籽粒中一种重要的生物活性化合物，因其有益健康的作用而闻名，引起了育种者和生产者的极大兴趣。本研究旨在鉴定新的数量性状位点（QTL），以帮助培育阿魏酸浓度（FAC）更高的小麦品种。

本文章由计算机程序翻译，如有差异，请以英文原文为准。

求助全文

约1分钟内获得全文去求助

来源期刊

Cereal Chemistry 工程技术-食品科技

CiteScore

5.10

自引率

8.30%

发文量

110

审稿时长

3 months

期刊介绍： Cereal Chemistry publishes high-quality papers reporting novel research and significant conceptual advances in genetics, biotechnology, composition, processing, and utilization of cereal grains (barley, maize, millet, oats, rice, rye, sorghum, triticale, and wheat), pulses (beans, lentils, peas, etc.), oilseeds, and specialty crops (amaranth, flax, quinoa, etc.). Papers advancing grain science in relation to health, nutrition, pet and animal food, and safety, along with new methodologies, instrumentation, and analysis relating to these areas are welcome, as are research notes and topical review papers. The journal generally does not accept papers that focus on nongrain ingredients, technology of a commercial or proprietary nature, or that confirm previous research without extending knowledge. Papers that describe product development should include discussion of underlying theoretical principles.