Towards a Quantitative Theory of Digraph-Based Complexes and its Applications in Brain Network Analysis

Heitor Baldo
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Abstract

In this work, we developed new mathematical methods for analyzing network topology and applied these methods to the analysis of brain networks. More specifically, we rigorously developed quantitative methods based on complexes constructed from digraphs (digraph-based complexes), such as path complexes and directed clique complexes (alternatively, we refer to these complexes as "higher-order structures," or "higher-order topologies," or "simplicial structures"), and, in the case of directed clique complexes, also methods based on the interrelations between the directed cliques, what we called "directed higher-order connectivities." This new quantitative theory for digraph-based complexes can be seen as a step towards the formalization of a "quantitative simplicial theory." Subsequently, we used these new methods, such as characterization measures and similarity measures for digraph-based complexes, to analyze the topology of digraphs derived from brain connectivity estimators, specifically the estimator known as information partial directed coherence (iPDC), which is a multivariate estimator that can be considered a representation of Granger causality in the frequency-domain, particularly estimated from electroencephalography (EEG) data from patients diagnosed with left temporal lobe epilepsy, in the delta, theta and alpha frequency bands, to try to find new biomarkers based on the higher-order structures and connectivities of these digraphs. In particular, we attempted to answer the following questions: How does the higher-order topology of the brain network change from the pre-ictal to the ictal phase, from the ictal to the post-ictal phase, at each frequency band and in each cerebral hemisphere? Does the analysis of higher-order structures provide new and better biomarkers for seizure dynamics and also for the laterality of the seizure focus than the usual graph theoretical analyses?
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基于数图的复合体定量理论及其在脑网络分析中的应用
在这项工作中,我们开发了分析网络拓扑的新数学方法,并将这些方法应用于大脑网络分析。更具体地说,我们严格开发了基于由数字图构建的复合体(基于数字图的复合体)的定量方法,如路径复合体和有向簇复合体(我们也将这些复合体称为 "高阶结构 "或 "高阶拓扑 "或 "简单结构"),对于有向簇复合体,我们还开发了基于有向簇之间相互关系的方法,我们称之为 "有向高阶连接性"。这一新的基于数图的复合体定量理论可以看作是向 "定量简约理论 "正规化迈出的一步。随后,我们利用这些新方法,如基于数图的复合体的特征量度和相似性量度,分析了从大脑连通性估计器(特别是被称为信息部分有向一致性(iPDC)的估计器)中得出的数图拓扑结构、iPDC是一种多变量估计器,可视为格兰杰因果关系在频域的呈现,特别是从诊断为左颞叶癫痫患者的脑电图(EEG)数据中估计出的δ、θ和α频段的数据,试图根据这些数图的高阶结构和连接性找到新的生物标记物。我们尤其试图回答以下问题:从发作前到发作期,从发作期到发作后,在每个频段和每个大脑半球,大脑网络的高阶拓扑结构是如何变化的?与通常的图论分析相比,对高阶结构的分析是否能为癫痫动态以及癫痫灶的侧向性提供新的、更好的生物标记?
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