The monodominant species Spirotropis longifolia is mainly nodulated by strains of the genus Bradyrhizobium outside the B. japonicum and B. elkanii superclades

IF 2.1 3区 生物学 Q3 MICROBIOLOGY Symbiosis Pub Date : 2024-09-14 DOI:10.1007/s13199-024-01010-5
Christine Le Roux, Emile Fonty, Laurent Brottier, Mathilde Bernard, Yves Prin, Daniel Sabatier
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Abstract

Spirotropis longifolia (DC.) Baill. is organized in monodominant forest patches in French Guiana. S. longifolia root nodules and forest soil samples were collected in three monodominant populations of S. longifolia and in four zones, from the S. longifolia core dominance to the adjacent mixed forest where this species was absent. S. longifolia roots presented arbuscular mycorrhizal fungus (AMF) structures, but no ectomycorrhizae. The presence of myconodule-like structures was only noted once. Isolates of S. longifolia and of diverse French Guianese legume trees were 95% identified as Bradyrhizobium spp. and rarely as Rhizobium spp. On a partial 16S rDNA phylogenetic tree, S. longifolia-associated bradyrhizobia were positioned in a separate cluster including the Bradyrhizobium sp. Tv2a-2 strain isolated from Tachigali versicolor in Panama. Bradyrhizobia of other forest legume trees were positioned identically, or differently, in various clusters. A partial 16S-23S rDNA internal transcribed spacer (ITS) phylogenetic tree confirmed that the main cluster accounting for 82% of the direct or trapped bradyrhizobia associated with S. longifolia was situated outside the B. japonicum and B. elkanii superclades, in the Tv2a-2 superclade/Kakadu supergroup. In this cluster, other bradyrhizobia appeared that were associated with legumes from the tribes Ormosieae, Brongniartieae and Dalbergieae, suggesting the possibility of a shared pool of the most ancestral symbionts that are bradyrhizobia with the Caesalpinoid legumes and the early-branching Papilionoid legumes. Curiously, the seven monodominant Fabaceae of the Amazonian forests were exclusively part of these subfamilies. The link between ancestral symbiosis and monodominance still remains to be studied.

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单优势种 Spirotropis longifolia 主要由日本农杆菌(B. japonicum)和麋鹿农杆菌(B. elkanii)超支链之外的稻田根瘤菌属菌株进行萌发
Spirotropis longifolia (DC.) Baill.分布在法属圭亚那的单优势森林斑块中。我们在三个长叶杉树单优势种群和四个区域(从长叶杉树核心优势区到邻近没有长叶杉树的混交林)采集了长叶杉树根瘤和森林土壤样本。S. longifolia的根呈现出丛生菌根真菌(AMF)结构,但没有外生菌根。只发现过一次类似菌核的结构。在部分 16S rDNA 系统发生树上,与 S. longifolia 相关的根瘤菌被置于一个独立的群中,其中包括从巴拿马 Tachigali versicolor 分离出的 Bradyrhizobium sp.其他森林豆科植物的根瘤阔叶菌在不同聚类中的位置相同或不同。部分 16S-23S rDNA 内部转录间隔(ITS)系统发生树证实,在与 S. longifolia 相关的直接或被困的根盘菌中,82% 的主要群落位于 B. japonicum 和 B. elkanii 超群之外,在 Tv2a-2 超群/Kakadu 超群中。在这个超群中,还出现了其他与豆科植物(Ormosieae、Brongniartieae和Dalbergieae)相关的根瘤芽孢杆菌,这表明根瘤芽孢杆菌与豆科植物(Caesalpinoid)和早期分支豆科植物(Papilionoid)的最祖先共生体可能是一个共享的共生体库。奇怪的是,亚马逊森林中的七种单优势豆科植物完全属于这些亚科。祖先共生与单优势之间的联系仍有待研究。
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来源期刊
Symbiosis
Symbiosis 生物-微生物学
CiteScore
4.80
自引率
8.00%
发文量
56
审稿时长
>12 weeks
期刊介绍: Since 1985, Symbiosis publishes original research that contributes to the understanding of symbiotic interactions in a wide range of associations at the molecular, cellular and organismic level. Reviews and short communications on well-known or new symbioses are welcomed as are book reviews and obituaries. This spectrum of papers aims to encourage and enhance interactions among researchers in this rapidly expanding field. Topics of interest include nutritional interactions; mutual regulatory and morphogenetic effects; structural co-adaptations; interspecific recognition; specificity; ecological adaptations; evolutionary consequences of symbiosis; and methods used for symbiotic research.
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Fungal community structure in bees: influence of biome and host species The monodominant species Spirotropis longifolia is mainly nodulated by strains of the genus Bradyrhizobium outside the B. japonicum and B. elkanii superclades The soil legacy produced by grass-endophyte-mycorrhizae fungi interaction increases legume establishment Are the symbiont faunas of the venomous echinoids Toxopneustes pileolus and Tripneustes gratilla (Echinoidea, Toxopneustidae) similar? Microbiome diversity and composition across development stages of the Blue Orchard Bee, Osmia lignaria (Megachilidae)
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