Characterization of regeneration initiating cells during Xenopus laevis tail regeneration.

IF 10.1 1区 生物学 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Genome Biology Pub Date : 2024-10-01 DOI:10.1186/s13059-024-03396-3
Radek Sindelka, Ravindra Naraine, Pavel Abaffy, Daniel Zucha, Daniel Kraus, Jiri Netusil, Karel Smetana, Lukas Lacina, Berwini Beduya Endaya, Jiri Neuzil, Martin Psenicka, Mikael Kubista
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Abstract

Background: Embryos are regeneration and wound healing masters. They rapidly close wounds and scarlessly remodel and regenerate injured tissue. Regeneration has been extensively studied in many animal models using new tools such as single-cell analysis. However, until now, they have been based primarily on experiments assessing from 1 day post injury.

Results: In this paper, we reveal that critical steps initiating regeneration occur within hours after injury. We discovered the regeneration initiating cells (RICs) using single-cell and spatial transcriptomics of the regenerating Xenopus laevis tail. RICs are formed transiently from the basal epidermal cells, and their expression signature suggests they are important for modifying the surrounding extracellular matrix thus regulating development. The absence or deregulation of RICs leads to excessive extracellular matrix deposition and defective regeneration.

Conclusion: RICs represent a newly discovered transient cell state involved in the initiation of the regeneration process.

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爪蟾尾部再生过程中再生启动细胞的特征。
背景介绍胚胎是再生和伤口愈合的大师。它们能迅速闭合伤口,无疤痕地重塑和再生受伤组织。人们利用单细胞分析等新工具对许多动物模型的再生进行了广泛研究。然而,到目前为止,这些研究主要基于损伤后 1 天的评估实验:结果:在本文中,我们揭示了启动再生的关键步骤发生在损伤后数小时内。我们利用单细胞和空间转录组学发现了再生启动细胞(RIC)。RIC 由基底表皮细胞瞬时形成,其表达特征表明它们对改变周围细胞外基质从而调节发育非常重要。RICs 的缺失或失调会导致细胞外基质过度沉积和再生缺陷:RIC代表了一种新发现的瞬时细胞状态,参与再生过程的启动。
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来源期刊
Genome Biology
Genome Biology Biochemistry, Genetics and Molecular Biology-Genetics
CiteScore
21.00
自引率
3.30%
发文量
241
审稿时长
2 months
期刊介绍: Genome Biology stands as a premier platform for exceptional research across all domains of biology and biomedicine, explored through a genomic and post-genomic lens. With an impressive impact factor of 12.3 (2022),* the journal secures its position as the 3rd-ranked research journal in the Genetics and Heredity category and the 2nd-ranked research journal in the Biotechnology and Applied Microbiology category by Thomson Reuters. Notably, Genome Biology holds the distinction of being the highest-ranked open-access journal in this category. Our dedicated team of highly trained in-house Editors collaborates closely with our esteemed Editorial Board of international experts, ensuring the journal remains on the forefront of scientific advances and community standards. Regular engagement with researchers at conferences and institute visits underscores our commitment to staying abreast of the latest developments in the field.
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