Modified oxymatrine as novel therapeutic inhibitors against Monkeypox and Marburg virus through computational drug design approaches

Md. Rezaul Islam, Suvro Biswas, Ummy Amena, Miadur Rahman, Shirmin Islam, Md. Ariful Islam, Md. Abu Saleh, Hesham M. Hassan, Ahmed Al-Emam, Magdi E. A. Zaki
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Abstract

Global impact of viral diseases specially Monkeypox (mpox) and Marburg virus, emphasizing the urgent need for effective drug interventions. Oxymatrine is an alkaloid which has been selected and modified using various functional groups to enhance its efficacy. The modifications were evaluated using various computatioanal analysis such as pass prediction, molecular docking, ADMET, and molecular dynamic simulation. Mpox and Marburg virus were chosen as target diseases based on their maximum pass prediction spectrum against viral disease. After that, molecular docking, dynamic simulation, DFT, calculation and ADMET prediction were determined. The main objective of this study was to enhance the efficacy of oxymatrine derivatives through functional group modifications and computational analyses to develop effective drug candidates against mpox and Marburg viruses. The calculated binding affinities indicated strong interactions against both mpox virus and Marburg virus. After that, the molecular dynamic simulation was conducted at 100 ns, which confirmed the stability of the binding interactions between the modified oxymatrine derivatives and target proteins. Then, the modified oxymatrine derivatives conducted theoretical ADMET profiling, which demonstrated their potential for effective drug development. Moreover, HOMO-LUMO calculation was performed to understand the chemical reactivity and physicochemical properties of compounds. This computational analysis indicated that modified oxymatrine derivatives for the treatment of mpox and Marburg virus suggested effective drug candidates based on their binding affinity, drug-like properties, stability and chemical reactivity. However, further experimental validation is necessary to confirm their clinical value and efficacy as therapeutic candidates.

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通过计算药物设计方法,将改良羟甲茶碱作为猴痘和马尔堡病毒的新型治疗抑制剂。
猴痘(mpox)和马尔堡病毒等病毒性疾病对全球的影响突出表明,迫切需要有效的药物干预措施。氧化苦参碱是一种生物碱,为了提高其药效,我们对其进行了筛选,并使用各种官能团对其进行了修饰。我们使用各种计算分析方法,如通过预测、分子对接、ADMET 和分子动态模拟,对这些修饰进行了评估。根据 Mpox 和马尔堡病毒对病毒性疾病的最大通过预测谱,选择这两种病毒作为目标疾病。然后,确定了分子对接、动态模拟、DFT、计算和 ADMET 预测。本研究的主要目的是通过官能团修饰和计算分析来提高氧化苦参碱衍生物的药效,从而开发出有效的抗 mpox 和马尔堡病毒候选药物。计算得出的结合亲和力表明,它们对痘病毒和马尔堡病毒都有很强的相互作用。随后,进行了 100 ns 的分子动力学模拟,证实了修饰的氧化苦参碱衍生物与靶蛋白之间结合作用的稳定性。然后,对修饰的氧化苦参碱衍生物进行了理论 ADMET 分析,证明了其有效开发药物的潜力。此外,还进行了 HOMO-LUMO 计算,以了解化合物的化学反应性和理化性质。计算分析表明,基于其结合亲和力、类药物特性、稳定性和化学反应性,用于治疗麻风腮和马尔堡病毒的改良氧化苦参碱衍生物是有效的候选药物。然而,要确认这些候选药物的临床价值和疗效,还需要进一步的实验验证。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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期刊介绍: The Journal of Cellular and Molecular Medicine serves as a bridge between physiology and cellular medicine, as well as molecular biology and molecular therapeutics. With a 20-year history, the journal adopts an interdisciplinary approach to showcase innovative discoveries. It publishes research aimed at advancing the collective understanding of the cellular and molecular mechanisms underlying diseases. The journal emphasizes translational studies that translate this knowledge into therapeutic strategies. Being fully open access, the journal is accessible to all readers.
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