AttriPrompter: Auto-Prompting with Attribute Semantics for Zero-shot Nuclei Detection via Visual-Language Pre-trained Models.

Yongjian Wu, Yang Zhou, Jiya Saiyin, Bingzheng Wei, Maode Lai, Jianzhong Shou, Yan Xu
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Abstract

Large-scale visual-language pre-trained models (VLPMs) have demonstrated exceptional performance in downstream object detection through text prompts for natural scenes. However, their application to zero-shot nuclei detection on histopathology images remains relatively unexplored, mainly due to the significant gap between the characteristics of medical images and the weboriginated text-image pairs used for pre-training. This paper aims to investigate the potential of the object-level VLPM, Grounded Language-Image Pre-training (GLIP), for zero-shot nuclei detection. Specifically, we propose an innovative auto-prompting pipeline, named AttriPrompter, comprising attribute generation, attribute augmentation, and relevance sorting, to avoid subjective manual prompt design. AttriPrompter utilizes VLPMs' text-to-image alignment to create semantically rich text prompts, which are then fed into GLIP for initial zero-shot nuclei detection. Additionally, we propose a self-trained knowledge distillation framework, where GLIP serves as the teacher with its initial predictions used as pseudo labels, to address the challenges posed by high nuclei density, including missed detections, false positives, and overlapping instances. Our method exhibits remarkable performance in label-free nuclei detection, out-performing all existing unsupervised methods and demonstrating excellent generality. Notably, this work highlights the astonishing potential of VLPMs pre-trained on natural image-text pairs for downstream tasks in the medical field as well. Code will be released at github.com/AttriPrompter.

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AttriPrompter:通过视觉语言预训练模型,利用属性语义自动提示进行零镜头核检测。
大规模视觉语言预训练模型(VLPM)在通过自然场景文本提示进行下游对象检测方面表现出了卓越的性能。然而,它们在组织病理学图像的零点核检测中的应用仍相对欠缺,这主要是由于医学图像的特征与用于预训练的源于网络的文本图像对之间存在巨大差距。本文旨在研究对象级 VLPM、Grounded Language-Image Pre-training (GLIP) 在零点核检测方面的潜力。具体来说,我们提出了一个创新的自动提示管道,名为 AttriPrompter,包括属性生成、属性增强和相关性排序,以避免主观的人工提示设计。AttriPrompter 利用 VLPM 的文本到图像对齐功能创建语义丰富的文本提示,然后将其输入 GLIP 进行初始零镜头核检测。此外,我们还提出了一个自我训练的知识提炼框架,由 GLIP 作为教师,将其初始预测作为伪标签,以应对高核密度带来的挑战,包括漏检、误报和重叠实例。我们的方法在无标签细胞核检测方面表现出色,优于所有现有的无监督方法,并显示出卓越的通用性。值得注意的是,这项工作凸显了在自然图像-文本对上预先训练的 VLPM 在医疗领域下游任务中的惊人潜力。代码将在 github.com/AttriPrompter 上发布。
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