Exploration of the Relationship between Polycystic Ovary Syndrome and Recurrent Pregnancy Loss Based on Bioinformatics.

Yuanyuan Wu, Linyu Qin, Guozhen He, Zhijuan Luo, Songping Luo
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Abstract

Background: Recurrent Pregnancy Loss (RPL) and Polycystic Ovary Syndrome (PCOS) are both common diseases involving women of childbearing age, and their pathogenesis is still not sufficiently known.

Objective: This study aimed to explore the relationship between RPL and PCOS in bioinformatics.

Methods: Two expression chips, GSE86241 (obtained from 8 PCOS patients and 9 healthy controls) and GSE73025 (obtained from 5 RPL patients and 5 healthy controls), were downloaded from the Gene Expression Omnibus (GEO) database. We used the GEO database to analyze the gene expression profiles of PCOS and RPL to identify the intersection of abnormal miRNA expression, predicted the target genes of the intersecting miRNAs from miRDB, miRTarBase, and TargetScan databases, and then incorporated the miRNA-mRNA modulation network. By using the string database, the PPI network was built, which could screen the Hub genes and enrich them for analysis. Ultimately, the critical miRNA-mRNA regulatory network was set on the basis of the relationship between hub genes and miRNA.

Results: A total of 39 significantly altered miRNAs of PCOS and 137 significantly altered miRNAs of RPL were obtained, three miRNAs (miR-767-5p, miR-3196, and miR-187-3p), five signaling pathways (PI3K-Akt, p53, Toll-like receptor, C-type lectin receptor, and TNF signaling pathways), and six Hub genes (CASP8, PIK3R1, ADAMTS2, ADAMTS3, COL3A1, and MDM2) were found to be related to the development and progression of two diseases. More importantly, all Hub genes were regulated by miR-767-5p.

Conclusion: This research clarifies the possible relationship between miRNA and mRNA with PCOS and RPL for the first time. It provides a basis for illustrating the pathogenic mechanism and a target of therapies for these two diseases.

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基于生物信息学的多囊卵巢综合征与复发性妊娠失败之间关系的探索。
背景:复发性妊娠丢失(RPL)和多囊卵巢综合征(PCOS)都是育龄妇女的常见疾病,但它们的发病机理至今仍未被充分认识:本研究旨在利用生物信息学方法探讨 RPL 与 PCOS 之间的关系:从基因表达总库(Gene Expression Omnibus,GEO)数据库中下载了两个表达芯片:GSE86241(取自 8 名 PCOS 患者和 9 名健康对照)和 GSE73025(取自 5 名 RPL 患者和 5 名健康对照)。我们利用 GEO 数据库分析了 PCOS 和 RPL 的基因表达谱,找出了 miRNA 表达异常的交叉点,并从 miRDB、miRTarBase 和 TargetScan 数据库中预测了交叉 miRNA 的靶基因,然后纳入了 miRNA-mRNA 调控网络。利用字符串数据库建立的 PPI 网络可以筛选 Hub 基因并对其进行富集分析。最终,根据枢纽基因与 miRNA 之间的关系确定了关键的 miRNA-mRNA 调控网络:结果:共获得了 39 个 PCOS 的显着改变 miRNA 和 137 个 RPL 的显着改变 miRNA,3 个 miRNA(miR-767-5p、miR-3196 和 miR-187-3p),5 个信号通路(PI3K-Akt、p53、Toll样受体、C型凝集素受体和TNF信号通路)以及六个Hub基因(CASP8、PIK3R1、ADAMTS2、ADAMTS3、COL3A1和MDM2)被发现与两种疾病的发生和发展有关。更重要的是,所有枢纽基因都受 miR-767-5p 的调控:这项研究首次阐明了 miRNA 和 mRNA 与 PCOS 和 RPL 的可能关系。结论:这项研究首次阐明了 miRNA 和 mRNA 与 PCOS 和 RPL 的可能关系,为阐明这两种疾病的致病机制和治疗靶点提供了依据。
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