KF-PLS: Optimizing Kernel Partial Least-Squares (K-PLS) with Kernel Flows

IF 3.7 2区 化学 Q2 AUTOMATION & CONTROL SYSTEMS Chemometrics and Intelligent Laboratory Systems Pub Date : 2024-10-01 DOI:10.1016/j.chemolab.2024.105238
Zina-Sabrina Duma , Jouni Susiluoto , Otto Lamminpää , Tuomas Sihvonen , Satu-Pia Reinikainen , Heikki Haario
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Abstract

Partial Least-Squares (PLS) regression is a widely used tool in chemometrics for performing multivariate regression. As PLS has a limited capacity of modelling non-linear relations between the predictor variables and the response, Kernel PLS (K-PLS) has been introduced for modelling non-linear predictor-response relations. Most available studies use fixed kernel parameters, reducing the performance potential of the method. Only a few studies have been conducted on optimizing the kernel parameters for K-PLS. In this article, we propose a methodology for the kernel function optimization based on Kernel Flows (KF), a technique developed for Gaussian Process Regression (GPR). The results are illustrated with four case studies. The case studies represent both numerical examples and real data used in classification and regression tasks. K-PLS optimized with KF, called KF-PLS in this study, is shown to yield good results in all illustrated scenarios, outperforming literature results and other non-linear regression methodologies. In the present study, KF-PLS has been compared to convolutional neural networks (CNN), random trees, ensemble methods, support vector machines (SVM), and GPR, and it has proved to perform very well.
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KF-PLS:利用内核流量优化内核部分最小二乘法(K-PLS)
偏最小二乘(PLS)回归是化学计量学中广泛使用的多元回归工具。由于 PLS 在模拟预测变量与响应之间的非线性关系方面能力有限,因此引入了核 PLS(K-PLS)来模拟预测变量与响应之间的非线性关系。大多数现有研究都使用固定的核参数,从而降低了该方法的性能潜力。只有少数研究对 K-PLS 的核参数进行了优化。在本文中,我们提出了一种基于核流量(KF)的核函数优化方法,这是一种为高斯过程回归(GPR)开发的技术。我们通过四个案例研究对结果进行了说明。这些案例研究既有数值示例,也有用于分类和回归任务的真实数据。使用 KF 优化的 K-PLS(在本研究中称为 KF-PLS)在所有案例中都取得了良好的结果,优于文献结果和其他非线性回归方法。在本研究中,KF-PLS 与卷积神经网络 (CNN)、随机树、集合方法、支持向量机 (SVM) 和 GPR 进行了比较,结果证明其表现非常出色。
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来源期刊
CiteScore
7.50
自引率
7.70%
发文量
169
审稿时长
3.4 months
期刊介绍: Chemometrics and Intelligent Laboratory Systems publishes original research papers, short communications, reviews, tutorials and Original Software Publications reporting on development of novel statistical, mathematical, or computer techniques in Chemistry and related disciplines. Chemometrics is the chemical discipline that uses mathematical and statistical methods to design or select optimal procedures and experiments, and to provide maximum chemical information by analysing chemical data. The journal deals with the following topics: 1) Development of new statistical, mathematical and chemometrical methods for Chemistry and related fields (Environmental Chemistry, Biochemistry, Toxicology, System Biology, -Omics, etc.) 2) Novel applications of chemometrics to all branches of Chemistry and related fields (typical domains of interest are: process data analysis, experimental design, data mining, signal processing, supervised modelling, decision making, robust statistics, mixture analysis, multivariate calibration etc.) Routine applications of established chemometrical techniques will not be considered. 3) Development of new software that provides novel tools or truly advances the use of chemometrical methods. 4) Well characterized data sets to test performance for the new methods and software. The journal complies with International Committee of Medical Journal Editors'' Uniform requirements for manuscripts.
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