A new strategy for systematically classifying HLA alleles into serological specificities: Update and refinement

IF 5.9 4区 医学 Q2 CELL BIOLOGY HLA Pub Date : 2024-10-22 DOI:10.1111/tan.15702
Kazutoyo Osoegawa, Kenneth Yim, Megan Jeracki, Tuan-Nghia Nguyen, Lin Wang, Andrew Cho, Rhidina David, Jellina Son, Arianne Mankey, Steven G. E. Marsh, Ketevan Gendzekhadze, Cathi Murphey, Marcelo A. Fernández Viňa
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Abstract

HLA antigens were historically defined according to the unique reactivity pattern of cells expressing HLA molecules with distinctive clusters of allo-antisera and/or monoclonal antibodies. Subsequently, amino acid residues determining epitopes (DEP) in the HLA molecule were correlated with reactivity patterns. In current clinical practice, the presence of allo-antibodies is assessed using Luminex-based solid phase single antigen bead (SAB) assays for transplantation. Recently, novel antigens were proposed for HLA molecules with DEP patterns that do not match any serologically defined antigens recognised by the WHO Nomenclature Committee. To validate the antigens, mean fluorescence intensity values of SABs tested on >13,000 patients' sera were extracted from clinical databases and analysed by scatter plots using a linear regression model. We found that when two proteins were considered as the same antigen in the original study, for example, HLA-A*02:01 and -A*02:06, their correlation ranked among the highest values at each locus. In contrast, discrete asymmetric outliers were observed when there were different antigens, for example, HLA-A*30:01 and -A*30:02, allowing validation and confirmation of 20 novel antigens for HLA-A, -B, -C and -DR. The outliers were confirmed to be true or false by flow cytometric crossmatches. In addition to the previously defined residues for antigen assignments, findings suggest that further distinction should be made for common antigens by including the substitutions at residue 67 of HLA-B, 67 and 74 of -DR. These serologic analyses can be applied systematically to identify and confirm novel antigens. These developments will lead to designing optimal SAB panels and further improving virtual donor-specific antibodies assessment.

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将 HLA 等位基因系统地划分为血清特异性的新策略:更新与完善。
历史上,HLA 抗原是根据表达 HLA 分子的细胞与独特的同种抗原和/或单克隆抗体群的独特反应模式定义的。随后,HLA 分子中决定表位(DEP)的氨基酸残基与反应模式相关联。在目前的临床实践中,异体抗体的存在是通过基于 Luminex 的固相单抗原珠(SAB)检测来评估的。最近,有人提出了新的 HLA 分子抗原,其 DEP 模式与世界卫生组织命名委员会认可的任何血清学定义抗原都不匹配。为了验证这些抗原,我们从临床数据库中提取了对超过 13,000 名患者的血清进行测试的 SAB 的平均荧光强度值,并使用线性回归模型对散点图进行了分析。我们发现,当两个蛋白质在原始研究中被视为相同抗原时,例如 HLA-A*02:01 和 -A*02:06,它们的相关性在每个位点上都属于最高值。相反,当存在不同抗原(如 HLA-A*30:01 和 -A*30:02)时,则观察到离散的不对称异常值,从而验证和确认了 20 个新的 HLA-A、-B、-C 和 -DR 抗原。异常值通过流式细胞术交叉配对确认真假。除了先前定义的抗原分配残基外,研究结果表明,还应通过 HLA-B 的残基 67、-DR 的残基 67 和 74 进一步区分常见抗原。这些血清学分析可系统地用于识别和确认新型抗原。这些进展将有助于设计最佳的 SAB 面板,并进一步改进虚拟供体特异性抗体评估。
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来源期刊
HLA
HLA Immunology and Microbiology-Immunology
CiteScore
3.00
自引率
28.80%
发文量
368
期刊介绍: HLA, the journal, publishes articles on various aspects of immunogenetics. These include the immunogenetics of cell surface antigens, the ontogeny and phylogeny of the immune system, the immunogenetics of cell interactions, the functional aspects of cell surface molecules and their natural ligands, and the role of tissue antigens in immune reactions. Additionally, the journal covers experimental and clinical transplantation, the relationships between normal tissue antigens and tumor-associated antigens, the genetic control of immune response and disease susceptibility, and the biochemistry and molecular biology of alloantigens and leukocyte differentiation. Manuscripts on molecules expressed on lymphoid cells, myeloid cells, platelets, and non-lineage-restricted antigens are welcomed. Lastly, the journal focuses on the immunogenetics of histocompatibility antigens in both humans and experimental animals, including their tissue distribution, regulation, and expression in normal and malignant cells, as well as the use of antigens as markers for disease.
期刊最新文献
The Full-Length Genomic Sequence of the HLA-B*46:01:25 Allele The HLA-A Allele, HLA-A*11:01:01:07, Identified by Third-Generation Sequencing The HLA-B*27:264 Allele Identified in a Volunteer Donor for Haematopoietic Stem Cell Transplant Characterisation of the Novel HLA-A*23:147 Allele Using New Next-Generation Sequencing Methods Identification of the Novel HLA-DPA1*01:214 Allele in a Brazilian Bone Marrow Donor
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