Correlation of LOXL2 expression in non-small cell lung cancer with immunotherapy.

IF 1.1 Q4 ONCOLOGY International journal of clinical and experimental pathology Pub Date : 2024-09-15 eCollection Date: 2024-01-01 DOI:10.62347/ZIEG9007
Haoyan Chen, Lele Liu, Mingjiong Zhang, Shuangshuang Wu, Jianqing Wu
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Abstract

Lung cancer is the most prevalent and lethal disease globally, with approximately 80% of cases being non-small cell lung cancer (NSCLC). NSCLC is primarily composed of lung squamous cell carcinoma (LUSC) and lung adenocarcinoma (LUAD). Despite chemotherapy currently being the primary treatment for NSCLC, chemotherapy resistance remains a significant challenge for patients. Recent studies have proposed immunotherapy as a promising new avenue for treating NSCLC. The association between the lysyl oxidase-like 2 (LOXL2) gene and NSCLC was explored using multiple online tools and bioinformatics analysis software based on the available datasets from TCGA. The immune microenvironment of the tumor was explored by calculating ImmuneScore, StromalScore, and TumorPurity of LUAD and LUSC and analyzing the infiltration of 22 immune cells in lung cancer tissues. LOXL2-related loads were obtained from the Xena database for LUSC and LUAD patients, and relevant prognostic genes were identified by analyzing survival curves. Functional and pathway enrichment analyses of prognostic, predictive genes were performed using Gene Ontology (GO) and the Kyoto Encyclopedia of Genes and Genomes (KEGG). The expression of LOXL2 in NSCLC was detected by RT-qPCR. LOXL2 may be involved in the progression of LUAD and LUSC and is closely related to the T-lymphocyte subpopulation, T-reg cells. SEMA7A and VEGFC are identified as the genes that interact with LOXL2 and could be used as prognostic signature genes in NSCLC patients. LOXL2 may become a prognostic marker and a new target for immunotherapy.

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非小细胞肺癌中 LOXL2 表达与免疫疗法的相关性。
肺癌是全球发病率和致死率最高的疾病,约 80% 的病例为非小细胞肺癌(NSCLC)。非小细胞肺癌主要包括肺鳞状细胞癌(LUSC)和肺腺癌(LUAD)。尽管化疗是目前治疗 NSCLC 的主要方法,但化疗耐药性仍是患者面临的一大挑战。最近的研究提出,免疫疗法是治疗 NSCLC 的一种前景广阔的新途径。基于TCGA的现有数据集,我们使用多种在线工具和生物信息学分析软件探讨了赖氨酰氧化酶样2(LOXL2)基因与NSCLC之间的关联。通过计算 LUAD 和 LUSC 的免疫得分(ImmuneScore)、基质得分(StromalScore)和肿瘤纯度(TumorPurity),并分析肺癌组织中 22 种免疫细胞的浸润情况,研究了肿瘤的免疫微环境。从 Xena 数据库中获得了 LUSC 和 LUAD 患者的 LOXL2 相关负荷,并通过分析生存曲线确定了相关预后基因。利用基因本体(GO)和京都基因与基因组百科全书(KEGG)对预后预测基因进行了功能和通路富集分析。通过RT-qPCR检测了LOXL2在NSCLC中的表达。LOXL2可能参与了LUAD和LUSC的进展,并与T淋巴细胞亚群T-调节细胞密切相关。SEMA7A和VEGFC是与LOXL2相互作用的基因,可作为NSCLC患者的预后特征基因。LOXL2可能成为预后标志和免疫疗法的新靶点。
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来源期刊
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发文量
42
审稿时长
1 months
期刊介绍: The International Journal of Clinical and Experimental Pathology (IJCEP, ISSN 1936-2625) is a peer reviewed, open access online journal. It was founded in 2008 by an international group of academic pathologists and scientists who are devoted to the scientific exploration of human disease and the rapid dissemination of original data. Unlike most other open access online journals, IJCEP will keep all the traditional features of paper print that we are all familiar with, such as continuous volume and issue numbers, as well as continuous page numbers to keep our warm feelings towards an academic journal. Unlike most other open access online journals, IJCEP will keep all the traditional features of paper print that we are all familiar with, such as continuous volume and issue numbers, as well as continuous page numbers to keep our warm feelings towards an academic journal.
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