Causal relationship between circulating immune cells and gastric cancer: a bidirectional Mendelian randomization analysis using UK Biobank and FinnGen datasets.

IF 1.5 4区 医学 Q4 ONCOLOGY Translational cancer research Pub Date : 2024-09-30 Epub Date: 2024-09-05 DOI:10.21037/tcr-24-480
Weimin Yang, Yang Ou, Hui Luo, Lijuan You, Heng Du
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Abstract

Background: The role of immune cells in cancer pathogenesis remains controversial due to conflicting reports, potentially arising from various confounding factors. Emerging evidence suggests that cancer can also influence immune cell populations and functions, making it challenging to investigate their causal relationship. Traditional observational studies often fail to eliminate all confounding factors and are prone to reverse causality. Therefore, we employ Mendelian randomization (MR) to determine the causal relationship between immune cells and cancer, as this method can identify causal relationships independent of confounding factors and avoid reverse causality.

Methods: Genome-wide association study (GWAS) summary statistics on immune traits, encompassing 310 immune cell phenotypes, were obtained from 3,757 European individuals, with peripheral blood immune cells tested using flow cytometry. GWAS summary statistics for gastric cancer were derived from 476,116 European individuals across two large-scale biobanks: the UK Biobank and FinnGen. Gastric cancer was identified by the International Classification of Diseases, 9th Revision (ICD-9), and 10th Revision (ICD-10) codes. Significant single nucleotide polymorphisms (SNPs) for immune traits were extracted at a threshold of P<1×10-5, while a threshold of P<5×10-8 was used for gastric cancer GWAS data. Linkage imbalance-based clumping was performed to obtain independent SNPs, and those with F<10 were excluded to mitigate weak instrument bias. Phenoscanner V2 was used to exclude SNPs directly associated with potential confounders or outcomes. Two-sample MR was conducted using five MR methods, with inverse-variance-weighted (IVW) as the primary analysis method. A false discovery rate (FDR) correction was used to reduce the likelihood of type 1 errors. In addition, we conducted MR-Egger intercept tests and Cochran's Q tests.

Results: The numbers of CD4-CD8- T cells and IgD-CD27- B cells were positively correlated with the development of gastric cancer, with odds ratios (ORs) of 1.15 [95% confidence interval (CI), 1.07-1.24; P<0.001; PFDR=0.041; IVW method] and 1.07 (95% CI, 1.03-1.11; P=0.001; PFDR=0.187; IVW method), respectively. However, the percentage of IgD+CD24- B cells in lymphocytes were negatively associated with the development of gastric cancer (OR =0.90; 95% CI, 0.84-0.96; P=0.002; PFDR=0.187; IVW method). MR analysis of the above three immune cell phenotypes showed no significant heterogeneity or horizontal pleiotropy. In the reverse MR analysis, gastric cancer was not causally associated with any of the immune cell phenotypes.

Conclusions: Circulating CD4-CD8- T cells and IgD-CD27- B cells are positively correlated with the development of gastric cancer, while the percentage of IgD+CD24- B cells in lymphocytes are negatively correlated. These findings provide insight into the relationship between immune cells and gastric cancer pathogenesis and may serve as a basis for the development of immunotherapies for gastric cancer.

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循环免疫细胞与胃癌之间的因果关系:利用英国生物库和芬兰基因数据集进行的双向孟德尔随机分析。
背景:免疫细胞在癌症发病机制中的作用仍存在争议,因为各种混杂因素可能导致相互矛盾的报道。新的证据表明,癌症也会影响免疫细胞的数量和功能,因此研究两者的因果关系具有挑战性。传统的观察性研究往往无法排除所有混杂因素,而且容易出现反向因果关系。因此,我们采用孟德尔随机化(Mendelian randomization,MR)方法来确定免疫细胞与癌症之间的因果关系,因为这种方法可以确定独立于混杂因素的因果关系,并避免反向因果关系:从 3,757 名欧洲人的外周血免疫细胞中获得了免疫特质的全基因组关联研究(GWAS)汇总统计数据,其中包括 310 种免疫细胞表型。胃癌的 GWAS 概要统计数据来自英国生物库(UK Biobank)和芬兰基因(FinnGen)两个大型生物库中的 476,116 名欧洲人。 胃癌根据《国际疾病分类》第 9 次修订版(ICD-9)和第 10 次修订版(ICD-10)代码确定。提取免疫特征的重要单核苷酸多态性(SNPs)的阈值为 P-5,而胃癌 GWAS 数据的阈值为 P-8。通过基于连锁不平衡的聚类分析,获得独立的 SNPs 和具有 FResults 的 SNPs:CD4-CD8- T细胞和IgD-CD27- B细胞的数量与胃癌的发生呈正相关,几率比(OR)分别为1.15[95%置信区间(CI),1.07-1.24;PFDR=0.041;IVW法]和1.07(95% CI,1.03-1.11;P=0.001;PFDR=0.187;IVW法)。然而,淋巴细胞中 IgD+CD24- B 细胞的百分比与胃癌的发生呈负相关(OR =0.90;95% CI,0.84-0.96;P=0.002;PFDR=0.187;IVW 法)。对上述三种免疫细胞表型的 MR 分析表明没有明显的异质性或水平褶积性。在反向 MR 分析中,胃癌与任何一种免疫细胞表型都没有因果关系:结论:循环 CD4-CD8- T 细胞和 IgD-CD27- B 细胞与胃癌的发生呈正相关,而淋巴细胞中 IgD+CD24- B 细胞的百分比呈负相关。这些发现有助于深入了解免疫细胞与胃癌发病机制之间的关系,并可作为开发胃癌免疫疗法的依据。
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2.10
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0.00%
发文量
252
期刊介绍: Translational Cancer Research (Transl Cancer Res TCR; Print ISSN: 2218-676X; Online ISSN 2219-6803; http://tcr.amegroups.com/) is an Open Access, peer-reviewed journal, indexed in Science Citation Index Expanded (SCIE). TCR publishes laboratory studies of novel therapeutic interventions as well as clinical trials which evaluate new treatment paradigms for cancer; results of novel research investigations which bridge the laboratory and clinical settings including risk assessment, cellular and molecular characterization, prevention, detection, diagnosis and treatment of human cancers with the overall goal of improving the clinical care of cancer patients. The focus of TCR is original, peer-reviewed, science-based research that successfully advances clinical medicine toward the goal of improving patients'' quality of life. The editors and an international advisory group of scientists and clinician-scientists as well as other experts will hold TCR articles to the high-quality standards. We accept Original Articles as well as Review Articles, Editorials and Brief Articles.
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