Cold-adapted characteristics and gene knockout of alkyl hydroperoxide reductase subunit C in Antarctic Psychrobacter sp. ANT206.

IF 4 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY World journal of microbiology & biotechnology Pub Date : 2024-10-21 DOI:10.1007/s11274-024-04158-w
Yanhua Hou, Jiarui Qiao, Shumiao Hou, Yatong Wang, Quanfu Wang
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Abstract

Alkyl hydroperoxide reductase subunit C (AhpC) contributes to the cellular defense against reactive oxygen species. However, it remains understudied in psychrophiles. Amino acid comparison demonstrated that AhpC from Psychrobacter sp. ANT206 (ANT206) (PsAhpC) revealed fewer numbers of Lys and more numbers of Gly, which might have favored higher flexibility at low temperature. The recombinant PsAhpC (rPsAhpC) was most active at 25 °C and retained 35% of its residual activity at 0 °C, indicating that it was a cold-adapted enzyme. Additionally, rPsAhpC demonstrated significant salt tolerance, sustaining its activity in the presence of 4.0 M NaCl. Molecular dynamics simulations indicated that PsAhpC had comparatively loose conformation, which facilitated reactions at low temperatures. Subsequently, an ahpc knockout mutant was constructed, and the growth rate of the knockout mutant significantly decreased, suggesting that ahpc might be crucial for the growth of ANT206 at low temperatures. The findings provide a robust foundation for further investigation into the structural features and catalytic characterization of cold-adapted AhpC. The structural characteristics of PsAhpC and its cold tolerance and salt tolerance may be applied to stress resistance breeding of various organisms.

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南极精神杆菌 ANT206 中烷基过氧化氢还原酶亚基 C 的冷适应特征和基因敲除。
烷基过氧化氢还原酶亚基 C(AhpC)有助于细胞抵御活性氧。然而,人们对精神嗜氧菌中的这种酶的研究仍然不足。氨基酸比较表明,来自精神杆菌 ANT206(ANT206)(PsAhpC)的 AhpC 含有较少的 Lys 和较多的 Gly,这可能有利于其在低温下具有较高的灵活性。重组 PsAhpC(rPsAhpC)在 25 °C 时活性最高,在 0 °C 时保留了 35% 的剩余活性,表明它是一种适应低温的酶。此外,rPsAhpC 还具有显著的耐盐性,在 4.0 M NaCl 的条件下仍能保持活性。分子动力学模拟表明,PsAhpC具有相对松散的构象,有利于在低温下进行反应。随后,构建了一个ahpc基因敲除突变体,该基因敲除突变体的生长速率显著下降,表明ahpc可能对ANT206在低温下的生长至关重要。这些发现为进一步研究低温适应性AhpC的结构特征和催化特性奠定了坚实的基础。PsAhpC的结构特征及其耐寒性和耐盐性可应用于各种生物的抗逆育种。
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来源期刊
World journal of microbiology & biotechnology
World journal of microbiology & biotechnology 工程技术-生物工程与应用微生物
CiteScore
6.30
自引率
2.40%
发文量
257
审稿时长
2.5 months
期刊介绍: World Journal of Microbiology and Biotechnology publishes research papers and review articles on all aspects of Microbiology and Microbial Biotechnology. Since its foundation, the Journal has provided a forum for research work directed toward finding microbiological and biotechnological solutions to global problems. As many of these problems, including crop productivity, public health and waste management, have major impacts in the developing world, the Journal especially reports on advances for and from developing regions. Some topics are not within the scope of the Journal. Please do not submit your manuscript if it falls into one of the following categories: · Virology · Simple isolation of microbes from local sources · Simple descriptions of an environment or reports on a procedure · Veterinary, agricultural and clinical topics in which the main focus is not on a microorganism · Data reporting on host response to microbes · Optimization of a procedure · Description of the biological effects of not fully identified compounds or undefined extracts of natural origin · Data on not fully purified enzymes or procedures in which they are applied All articles published in the Journal are independently refereed.
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