UNSUPERVISED AIRWAY TREE CLUSTERING WITH DEEP LEARNING: THE MULTI-ETHNIC STUDY OF ATHEROSCLEROSIS (MESA) LUNG STUDY.

Sneha N Naik, Elsa D Angelini, R Graham Barr, Norrina Allen, Alain Bertoni, Eric A Hoffman, Ani Manichaikul, Jim Pankow, Wendy Post, Yifei Sun, Karol Watson, Benjamin M Smith, Andrew F Laine
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Abstract

High-resolution full lung CT scans now enable the detailed segmentation of airway trees up to the 6th branching generation. The airway binary masks display very complex tree structures that may encode biological information relevant to disease risk and yet remain challenging to exploit via traditional methods such as meshing or skeletonization. Recent clinical studies suggest that some variations in shape patterns and caliber of the human airway tree are highly associated with adverse health outcomes, including all-cause mortality and incident COPD. However, quantitative characterization of variations observed on CT segmented airway tree remain incomplete, as does our understanding of the clinical and developmental implications of such. In this work, we present an unsupervised deep-learning pipeline for feature extraction and clustering of human airway trees, learned directly from projections of 3D airway segmentations. We identify four reproducible and clinically distinct airway sub-types in the MESA Lung CT cohort.

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利用深度学习进行无监督气道树聚类:多种族动脉粥样硬化研究(MESA)肺研究。
现在,高分辨率全肺 CT 扫描可对气道树进行详细分割,直至第 6 代分支。气道二元掩模显示了非常复杂的气道树结构,这些结构可能编码了与疾病风险相关的生物信息,但通过网格化或骨架化等传统方法进行利用仍具有挑战性。最近的临床研究表明,人体气道树形状模式和口径的某些变化与不良健康后果(包括全因死亡率和慢性阻塞性肺病)密切相关。然而,在 CT 分段气道树上观察到的变化的定量特征描述仍不完整,我们对其临床和发育影响的理解也是如此。在这项工作中,我们提出了一种用于人类气道树特征提取和聚类的无监督深度学习管道,该管道直接从三维气道分割的投影中学习。我们在 MESA 肺 CT 队列中确定了四种可重复且临床上截然不同的气道亚型。
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