A comprehensive review of livestock development: insights into domestication, phylogenetics, diversity, and genomic advances.

IF 2.7 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Mammalian Genome Pub Date : 2024-12-01 Epub Date: 2024-10-14 DOI:10.1007/s00335-024-10075-y
Sonali Sonejita Nayak, Divya Rajawat, Karan Jain, Anurodh Sharma, Cedric Gondro, Ayon Tarafdar, Triveni Dutt, Manjit Panigrahi
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Abstract

Livestock plays an essential role in sustaining human livelihoods, offering a diverse range of species integral to food security, economic stability, and cultural traditions. The domestication of livestock, which began over 10,000 years ago, has driven significant genetic changes in species such as cattle, buffaloes, sheep, goats, and pigs. Recent advancements in genomic technologies, including next-generation sequencing (NGS), genome-wide association studies (GWAS), and genomic selection, have dramatically enhanced our understanding of these genetic developments. This review brings together key research on the domestication process, phylogenetics, genetic diversity, and selection signatures within major livestock species. It emphasizes the importance of admixture studies and evolutionary forces like natural selection, genetic drift, and gene flow in shaping livestock populations. Additionally, the integration of machine learning with genomic data offers new perspectives on the functional roles of genes in adaptation and evolution. By exploring these genomic advancements, this review provides insights into genetic variation and evolutionary processes that could inform future approaches to improving livestock management and adaptation to environmental challenges, including climate change.

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家畜发展的全面回顾:对驯化、系统发育、多样性和基因组进展的见解。
牲畜在维持人类生计方面发挥着至关重要的作用,其种类繁多,是粮食安全、经济稳定和文化传统不可或缺的组成部分。家畜的驯化始于一万多年前,推动了牛、水牛、绵羊、山羊和猪等物种基因的重大变化。基因组技术的最新进展,包括下一代测序(NGS)、全基因组关联研究(GWAS)和基因组选择,极大地增强了我们对这些基因发展的了解。本综述汇集了有关主要家畜物种的驯化过程、系统发育、遗传多样性和选择特征的关键研究。它强调了混杂研究以及自然选择、遗传漂变和基因流等进化力量在塑造家畜种群方面的重要性。此外,机器学习与基因组数据的整合为基因在适应和进化中的功能作用提供了新的视角。通过探讨这些基因组学方面的进展,本综述提供了对基因变异和进化过程的见解,可为未来改善家畜管理和适应环境挑战(包括气候变化)的方法提供参考。
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来源期刊
Mammalian Genome
Mammalian Genome 生物-生化与分子生物学
CiteScore
4.00
自引率
0.00%
发文量
33
审稿时长
6-12 weeks
期刊介绍: Mammalian Genome focuses on the experimental, theoretical and technical aspects of genetics, genomics, epigenetics and systems biology in mouse, human and other mammalian species, with an emphasis on the relationship between genotype and phenotype, elucidation of biological and disease pathways as well as experimental aspects of interventions, therapeutics, and precision medicine. The journal aims to publish high quality original papers that present novel findings in all areas of mammalian genetic research as well as review articles on areas of topical interest. The journal will also feature commentaries and editorials to inform readers of breakthrough discoveries as well as issues of research standards, policies and ethics.
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