The liquid lectin array detects compositional glycocalyx differences using multivalent DNA-encoded lectins on phage

IF 6.6 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Cell Chemical Biology Pub Date : 2024-10-24 DOI:10.1016/j.chembiol.2024.09.010
Guilherme M. Lima, Zeinab Jame-Chenarboo, Mirat Sojitra, Susmita Sarkar, Eric J. Carpenter, Claire Y. Yang, Edward Schmidt, Justine Lai, Alexey Atrazhev, Danial Yazdan, Chuanhao Peng, Elizabeth A. Volker, Ray Ho, Gisele Monteiro, Raymond Lai, Lara K. Mahal, Matthew S. Macauley, Ratmir Derda
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Abstract

Selective detection of disease-associated changes in the glycocalyx is an emerging field in modern targeted therapies. Detecting minor glycan changes on the cell surface is a challenge exacerbated by the lack of correspondence between cellular DNA/RNA and glycan structures. We demonstrate that multivalent displays of lectins on DNA-barcoded phages—liquid lectin array (LiLA)—detect subtle differences in density of glycans on cells. LiLA constructs displaying 73 copies of diCBM40 (CBM) lectin per virion (φ-CBM73) exhibit non-linear ON/OFF-like recognition of sialoglycans on the surface of normal and cancer cells. A high-valency φ-CBM290 display, or soluble CBM protein, cannot amplify the subtle differences detected by φ-CBM73. Similarly, multivalent displays of CBM and Siglec-7 detect differences in the glycocalyx between stem-like and non-stem populations in cancer. Multivalent display of lectins offer in situ detection of minor differences in glycocalyx in cells both in vitro and in vivo not feasible to currently available technologies.

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液体凝集素阵列利用噬菌体上的多价 DNA 编码凝集素检测糖萼的组成差异
选择性检测糖萼中与疾病相关的变化是现代靶向疗法的一个新兴领域。由于细胞 DNA/RNA 与聚糖结构之间缺乏对应关系,因此检测细胞表面的微小聚糖变化是一项挑战。我们证明了 DNA 条形编码噬菌体上凝集素的多价显示--液体凝集素阵列(LiLA)--能检测到细胞上聚糖密度的细微差别。LiLA构建体在每个病毒粒子上显示73个diCBM40(CBM)凝集素拷贝(φ-CBM73),对正常细胞和癌细胞表面的硅聚糖进行非线性ON/OFF式识别。高活性的φ-CBM290 或可溶性 CBM 蛋白无法放大φ-CBM73 所检测到的微妙差异。同样,CBM 和 Siglec-7 的多价显示也能检测出癌症中干细胞和非干细胞之间糖萼的差异。凝集素的多价显示技术可在体外和体内原位检测细胞中糖萼的细微差别,这是目前可用的技术无法做到的。
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来源期刊
Cell Chemical Biology
Cell Chemical Biology Biochemistry, Genetics and Molecular Biology-Molecular Medicine
CiteScore
14.70
自引率
2.30%
发文量
143
期刊介绍: Cell Chemical Biology, a Cell Press journal established in 1994 as Chemistry & Biology, focuses on publishing crucial advances in chemical biology research with broad appeal to our diverse community, spanning basic scientists to clinicians. Pioneering investigations at the chemistry-biology interface, the journal fosters collaboration between these disciplines. We encourage submissions providing significant conceptual advancements of broad interest across chemical, biological, clinical, and related fields. Particularly sought are articles utilizing chemical tools to perturb, visualize, and measure biological systems, offering unique insights into molecular mechanisms, disease biology, and therapeutics.
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