A Novel Dictionary Learning Algorithm Based on Prior Knowledge for fMRI Data Analysis

IF 3 4区 计算机科学 Q2 ENGINEERING, ELECTRICAL & ELECTRONIC International Journal of Imaging Systems and Technology Pub Date : 2024-10-27 DOI:10.1002/ima.23195
Fangmin Sheng, Yuhu Shi, Lei Wang, Ying Li, Hua Zhang, Weiming Zeng
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Abstract

Task-based functional magnetic resonance imaging (fMRI) has been widely utilized for brain activation detection and functional network analysis. In recent years, the K-singular value decomposition (K-SVD) algorithm has gained increasing attention in the research of fMRI data analysis methods. In this study, we propose a novel temporal feature region-growing constrained K-SVD algorithm that incorporates task-based fMRI temporal prior knowledge and utilizes a region-growing algorithm to infer potential activation locations. The algorithm incorporates temporal and spatial constraints to enhance the detection of brain activation. Specifically, this paper improves the three stages of the traditional K-SVD algorithm. First, in the dictionary initialization stage, the automatic target generation process with an independent component analysis algorithm is utilized in conjunction with prior knowledge to enhance the accuracy of initialization. Second, in the sparse coding stage, the region-growing algorithm is employed to infer potential activation locations based on temporal prior knowledge, thereby imposing spatial constraints to limit the extent of activation regions. Finally, in the dictionary learning stage, soft constraints and low correlation constraints are applied to reinforce the consistency with prior knowledge and enhance the robustness of learning for task-related atoms. The proposed method was validated on simulated and real fMRI data, showing superior performance in detecting brain activation compared with traditional methods. The results indicate that the algorithm accurately identifies activated brain regions, providing an effective approach for studying brain function in clinical applications.

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基于先验知识的新型词典学习算法,用于 fMRI 数据分析
基于任务的功能磁共振成像(fMRI)已被广泛用于脑激活检测和功能网络分析。近年来,K-singular 值分解(K-SVD)算法在 fMRI 数据分析方法的研究中越来越受到重视。在本研究中,我们提出了一种新颖的时间特征区域增长约束 K-SVD 算法,该算法结合了基于任务的 fMRI 时间先验知识,并利用区域增长算法来推断潜在的激活位置。该算法结合了时间和空间约束,以增强对大脑激活的检测。具体来说,本文改进了传统 K-SVD 算法的三个阶段。首先,在字典初始化阶段,利用独立成分分析算法的自动目标生成过程,结合先验知识,提高初始化的准确性。其次,在稀疏编码阶段,利用区域增长算法根据时间先验知识推断潜在的激活位置,从而施加空间约束以限制激活区域的范围。最后,在字典学习阶段,应用软约束和低相关性约束来加强与先验知识的一致性,并提高任务相关原子学习的鲁棒性。所提出的方法在模拟和真实的 fMRI 数据上进行了验证,结果表明与传统方法相比,该方法在检测大脑激活方面表现出色。结果表明,该算法能准确识别激活的大脑区域,为临床应用中的大脑功能研究提供了一种有效的方法。
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来源期刊
International Journal of Imaging Systems and Technology
International Journal of Imaging Systems and Technology 工程技术-成像科学与照相技术
CiteScore
6.90
自引率
6.10%
发文量
138
审稿时长
3 months
期刊介绍: The International Journal of Imaging Systems and Technology (IMA) is a forum for the exchange of ideas and results relevant to imaging systems, including imaging physics and informatics. The journal covers all imaging modalities in humans and animals. IMA accepts technically sound and scientifically rigorous research in the interdisciplinary field of imaging, including relevant algorithmic research and hardware and software development, and their applications relevant to medical research. The journal provides a platform to publish original research in structural and functional imaging. The journal is also open to imaging studies of the human body and on animals that describe novel diagnostic imaging and analyses methods. Technical, theoretical, and clinical research in both normal and clinical populations is encouraged. Submissions describing methods, software, databases, replication studies as well as negative results are also considered. The scope of the journal includes, but is not limited to, the following in the context of biomedical research: Imaging and neuro-imaging modalities: structural MRI, functional MRI, PET, SPECT, CT, ultrasound, EEG, MEG, NIRS etc.; Neuromodulation and brain stimulation techniques such as TMS and tDCS; Software and hardware for imaging, especially related to human and animal health; Image segmentation in normal and clinical populations; Pattern analysis and classification using machine learning techniques; Computational modeling and analysis; Brain connectivity and connectomics; Systems-level characterization of brain function; Neural networks and neurorobotics; Computer vision, based on human/animal physiology; Brain-computer interface (BCI) technology; Big data, databasing and data mining.
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