DTA Atlas: A massive-scale drug repurposing database

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Abstract

The drug development process is costly and time-consuming. Repurposing existing approved drugs, an efficient and cost-effective strategy, involves assessing numerous drug-protein pairs to uncover new interactions. While modern in silico methods enhance scalability, an open database for projected drug-target interactions across the entire human proteome is still lacking. In this work, we introduce an open database of predicted drug-target interactions, termed DTA Atlas, covering the entire human proteome as well as a wide range of marketed drugs, resulting in over 220 million drug-target pairs. The database integrates 4 billion affinity predictions from advanced deep neural networks and offers a user-friendly web interface, enabling users to explore drug-target affinity predictions for the human proteome. To the best of our knowledge, DTA Atlas represents the first comprehensive collection of drug-target binding strength predictions. It is open-source and can serve as an important resource for drug development, drug repurposing, toxicity studies and more.
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DTA Atlas:大规模药物再利用数据库
药物开发过程耗资巨大、耗时漫长。对现有获批药物进行再利用是一种高效且具有成本效益的策略,它涉及评估众多药物-蛋白质配对,以发现新的相互作用。虽然现代的硅学方法提高了可扩展性,但目前仍缺乏一个开放的数据库来预测整个人类蛋白质组中药物与靶点的相互作用。在这项工作中,我们引入了一个预测药物-靶点相互作用的开放式数据库,称为 DTA Atlas,它涵盖了整个人类蛋白质组以及各种上市药物,从而产生了超过 2.2 亿个药物-靶点配对。该数据库整合了来自高级深度神经网络的 40 亿次亲和力预测,并提供了用户友好的网络界面,使用户能够探索人类蛋白质组的药物-靶点亲和力预测。据我们所知,DTA Atlas 是第一个全面的药物-靶点结合强度预测集合。它是开源的,可作为药物开发、药物再利用、毒性研究等方面的重要资源。
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来源期刊
Artificial intelligence in the life sciences
Artificial intelligence in the life sciences Pharmacology, Biochemistry, Genetics and Molecular Biology (General), Computer Science Applications, Health Informatics, Drug Discovery, Veterinary Science and Veterinary Medicine (General)
CiteScore
5.00
自引率
0.00%
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0
审稿时长
15 days
期刊最新文献
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