Diffracting crystals of an intrinsically disordered protein (IDP) AtPP16-1 grown in 1.3 V cm−1 DC field

IF 1.7 4区 材料科学 Q3 CRYSTALLOGRAPHY Journal of Crystal Growth Pub Date : 2024-10-24 DOI:10.1016/j.jcrysgro.2024.127959
Noorul Huda, Halavath Ramesh, Abani K. Bhuyan
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Abstract

DC electric field as weak as ∼1.3 V cm−1 induces crystal nucleation in very dilute protein solutions lacking precipitant. The basis of such growth is the microscopic model of interaction of protein dipoles with the Stark field, leading to glass-like amorphous aggregation and reconfiguration of the aggregates for crystal nucleation. This modest approach is very different from an earlier and rather ‘aggressive’ one in which electric field of ∼1 kV or orders of magnitude in excess is used to influence charge migration in a highly concentrated protein solution having precipitant confined to the crystallization drop. As an application of the precipitant-lacking ultralow protein method, the present work seeks the assistance of internally supplied 1.3 V cm−1 DC field to crystallize an intrinsically disordered protein (IDP) called AtPP16-1 in a 0.017 mg mL−1 solution. Crystallization is allowed in cuvette cells of spectrometers with online electric field, enabling measurement of real time changes in spectral features. The average crystal size increases with the time of passage of the electric field, from ∼0.042 at 10 min to 0.165 µm at the end of 300 min. The cubic crystals diffract electron and X-ray. Electron diffraction spot indexing yields lattice spacing dhkl ∼ 2.85 Å, consistent with 2.88 Å found from powder X-ray diffraction analysis. This level of lattice spacing will correspond to moderately resolved crystal structure of the IDP.
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在 1.3 V cm-1 直流电场中生长的本征无序蛋白 (IDP) AtPP16-1 衍射晶体
在缺乏沉淀剂的极稀薄蛋白质溶液中,弱至 1.3 V cm-1 的直流电场可诱导晶体成核。这种生长的基础是蛋白质偶极子与斯塔克电场相互作用的微观模型,它导致玻璃状无定形聚集,并重新配置聚集体以形成晶体核。这种适度的方法与早期相当 "激进 "的方法截然不同,早期的方法是在高浓度蛋白质溶液中使用 1 kV 或更高数量级的电场来影响电荷迁移,而沉淀剂则被限制在结晶滴中。作为缺乏沉淀剂的超低蛋白质方法的一种应用,本研究工作寻求内部提供的 1.3 V cm-1 直流电场的帮助,以结晶 0.017 mg mL-1 溶液中名为 AtPP16-1 的本征无序蛋白 (IDP)。结晶可在具有在线电场的光谱仪的比色池中进行,从而能够测量光谱特征的实时变化。晶体的平均尺寸随电场通过时间的增加而增大,从 10 分钟时的 0.042 微米增至 300 分钟结束时的 0.165 微米。立方晶体可衍射电子和 X 射线。电子衍射光斑索引得出的晶格间距 dhkl ∼ 2.85 Å,与粉末 X 射线衍射分析得出的 2.88 Å 一致。这种晶格间距相当于 IDP 的中等分辨率晶体结构。
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来源期刊
Journal of Crystal Growth
Journal of Crystal Growth 化学-晶体学
CiteScore
3.60
自引率
11.10%
发文量
373
审稿时长
65 days
期刊介绍: The journal offers a common reference and publication source for workers engaged in research on the experimental and theoretical aspects of crystal growth and its applications, e.g. in devices. Experimental and theoretical contributions are published in the following fields: theory of nucleation and growth, molecular kinetics and transport phenomena, crystallization in viscous media such as polymers and glasses; crystal growth of metals, minerals, semiconductors, superconductors, magnetics, inorganic, organic and biological substances in bulk or as thin films; molecular beam epitaxy, chemical vapor deposition, growth of III-V and II-VI and other semiconductors; characterization of single crystals by physical and chemical methods; apparatus, instrumentation and techniques for crystal growth, and purification methods; multilayer heterostructures and their characterisation with an emphasis on crystal growth and epitaxial aspects of electronic materials. A special feature of the journal is the periodic inclusion of proceedings of symposia and conferences on relevant aspects of crystal growth.
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