Exploring Electronic and Conformational Attributes of an Organic Donor-Bridge-Acceptor Molecular System

IF 2.9 4区 工程技术 Q1 MULTIDISCIPLINARY SCIENCES Advanced Theory and Simulations Pub Date : 2024-10-30 DOI:10.1002/adts.202301212
Nikolas Echeverri, Jose Dario Perea, Salvador Leon
{"title":"Exploring Electronic and Conformational Attributes of an Organic Donor-Bridge-Acceptor Molecular System","authors":"Nikolas Echeverri, Jose Dario Perea, Salvador Leon","doi":"10.1002/adts.202301212","DOIUrl":null,"url":null,"abstract":"This research explores the electronic properties and conformational dynamics of the ZnP-COPV-<span data-altimg=\"/cms/asset/0c20fd31-fb7b-48b3-a778-9444ef387a5e/adts202301212-math-0002.png\"></span><mjx-container ctxtmenu_counter=\"55\" ctxtmenu_oldtabindex=\"1\" jax=\"CHTML\" role=\"application\" sre-explorer- style=\"font-size: 103%; position: relative;\" tabindex=\"0\"><mjx-math aria-hidden=\"true\" location=\"graphic/adts202301212-math-0002.png\"><mjx-semantics><mjx-msub data-semantic-children=\"0,1\" data-semantic- data-semantic-role=\"latinletter\" data-semantic-speech=\"normal upper C 60\" data-semantic-type=\"subscript\"><mjx-mi data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"normal\" data-semantic- data-semantic-parent=\"2\" data-semantic-role=\"latinletter\" data-semantic-type=\"identifier\"><mjx-c></mjx-c></mjx-mi><mjx-script style=\"vertical-align: -0.15em;\"><mjx-mn data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"normal\" data-semantic- data-semantic-parent=\"2\" data-semantic-role=\"integer\" data-semantic-type=\"number\" size=\"s\"><mjx-c></mjx-c><mjx-c></mjx-c></mjx-mn></mjx-script></mjx-msub></mjx-semantics></mjx-math><mjx-assistive-mml display=\"inline\" unselectable=\"on\"><math altimg=\"urn:x-wiley:25130390:media:adts202301212:adts202301212-math-0002\" display=\"inline\" location=\"graphic/adts202301212-math-0002.png\" xmlns=\"http://www.w3.org/1998/Math/MathML\"><semantics><msub data-semantic-=\"\" data-semantic-children=\"0,1\" data-semantic-role=\"latinletter\" data-semantic-speech=\"normal upper C 60\" data-semantic-type=\"subscript\"><mi data-semantic-=\"\" data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"normal\" data-semantic-parent=\"2\" data-semantic-role=\"latinletter\" data-semantic-type=\"identifier\" mathvariant=\"normal\">C</mi><mn data-semantic-=\"\" data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"normal\" data-semantic-parent=\"2\" data-semantic-role=\"integer\" data-semantic-type=\"number\">60</mn></msub>${\\rm C}_{60}$</annotation></semantics></math></mjx-assistive-mml></mjx-container> (Zinc Porphyrin - Carbon bridged Oligo Phenylenevinylene - Fullerene) organic semiconductor via specialized Density Functional Theory (DFT) and Molecular Dynamics (MD) computational techniques. First, through DFT calculations, essential HOMO (Highest Occupied Molecular Orbital), LUMO (Lowest Unoccupied Molecular Orbital), and Molecular Electrostatic Potential (MEP) electronic attributes are meticulously dissected providing insights into the intricate charge transfer processes between the constituent donor-acceptor moieties. Furthermore, MD simulations are employed to unveil the molecular system's multifaceted conformational flexibility and stability. The Root-mean-squared deviation (RMSD), end-to-end distance, and torsional angles quantitative analysis of conformational attributes support the carbon-bridged oligo-phenylenevinylene (COPV) molecular wire's <span data-altimg=\"/cms/asset/9eecd762-e922-46f9-adbc-1db07b50a5f7/adts202301212-math-0003.png\"></span><mjx-container ctxtmenu_counter=\"56\" ctxtmenu_oldtabindex=\"1\" jax=\"CHTML\" role=\"application\" sre-explorer- style=\"font-size: 103%; position: relative;\" tabindex=\"0\"><mjx-math aria-hidden=\"true\" location=\"graphic/adts202301212-math-0003.png\"><mjx-semantics><mjx-mi data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"italic\" data-semantic- data-semantic-role=\"greekletter\" data-semantic-speech=\"pi\" data-semantic-type=\"identifier\"><mjx-c></mjx-c></mjx-mi></mjx-semantics></mjx-math><mjx-assistive-mml display=\"inline\" unselectable=\"on\"><math altimg=\"urn:x-wiley:25130390:media:adts202301212:adts202301212-math-0003\" display=\"inline\" location=\"graphic/adts202301212-math-0003.png\" xmlns=\"http://www.w3.org/1998/Math/MathML\"><semantics><mi data-semantic-=\"\" data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"italic\" data-semantic-role=\"greekletter\" data-semantic-speech=\"pi\" data-semantic-type=\"identifier\">π</mi>$\\pi$</annotation></semantics></math></mjx-assistive-mml></mjx-container>-skeleton planar and rigid conformation. This minimal end-to-end distance variation (within <span data-altimg=\"/cms/asset/53245747-2f9a-49ac-ba06-47d8641cafed/adts202301212-math-0004.png\"></span><mjx-container ctxtmenu_counter=\"57\" ctxtmenu_oldtabindex=\"1\" jax=\"CHTML\" role=\"application\" sre-explorer- style=\"font-size: 103%; position: relative;\" tabindex=\"0\"><mjx-math aria-hidden=\"true\" location=\"graphic/adts202301212-math-0004.png\"><mjx-semantics><mjx-mrow data-semantic-children=\"1\" data-semantic-content=\"0\" data-semantic- data-semantic-role=\"addition\" data-semantic-speech=\"plus or minus 1\" data-semantic-type=\"prefixop\"><mjx-mo data-semantic- data-semantic-operator=\"prefixop,±\" data-semantic-parent=\"2\" data-semantic-role=\"addition\" data-semantic-type=\"operator\" rspace=\"1\" style=\"margin-left: 0.056em;\"><mjx-c></mjx-c></mjx-mo><mjx-mn data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"normal\" data-semantic- data-semantic-parent=\"2\" data-semantic-role=\"integer\" data-semantic-type=\"number\"><mjx-c></mjx-c></mjx-mn></mjx-mrow></mjx-semantics></mjx-math><mjx-assistive-mml display=\"inline\" unselectable=\"on\"><math altimg=\"urn:x-wiley:25130390:media:adts202301212:adts202301212-math-0004\" display=\"inline\" location=\"graphic/adts202301212-math-0004.png\" xmlns=\"http://www.w3.org/1998/Math/MathML\"><semantics><mrow data-semantic-=\"\" data-semantic-children=\"1\" data-semantic-content=\"0\" data-semantic-role=\"addition\" data-semantic-speech=\"plus or minus 1\" data-semantic-type=\"prefixop\"><mo data-semantic-=\"\" data-semantic-operator=\"prefixop,±\" data-semantic-parent=\"2\" data-semantic-role=\"addition\" data-semantic-type=\"operator\">±</mo><mn data-semantic-=\"\" data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"normal\" data-semantic-parent=\"2\" data-semantic-role=\"integer\" data-semantic-type=\"number\">1</mn></mrow>$\\pm 1$</annotation></semantics></math></mjx-assistive-mml></mjx-container> Å) compared to the initially extended structure and the constrained torsional motion (within <span data-altimg=\"/cms/asset/e76b61e2-9fb8-4bdc-8238-3706996a9814/adts202301212-math-0005.png\"></span><mjx-container ctxtmenu_counter=\"58\" ctxtmenu_oldtabindex=\"1\" jax=\"CHTML\" role=\"application\" sre-explorer- style=\"font-size: 103%; position: relative;\" tabindex=\"0\"><mjx-math aria-hidden=\"true\" location=\"graphic/adts202301212-math-0005.png\"><mjx-semantics><mjx-mrow data-semantic-children=\"3\" data-semantic-content=\"0\" data-semantic- data-semantic-role=\"addition\" data-semantic-speech=\"plus or minus 20 Superscript ring\" data-semantic-type=\"prefixop\"><mjx-mo data-semantic- data-semantic-operator=\"prefixop,±\" data-semantic-parent=\"4\" data-semantic-role=\"addition\" data-semantic-type=\"operator\" rspace=\"1\" style=\"margin-left: 0.056em;\"><mjx-c></mjx-c></mjx-mo><mjx-msup data-semantic-children=\"1,2\" data-semantic- data-semantic-parent=\"4\" data-semantic-role=\"integer\" data-semantic-type=\"superscript\"><mjx-mn data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"normal\" data-semantic- data-semantic-parent=\"3\" data-semantic-role=\"integer\" data-semantic-type=\"number\"><mjx-c></mjx-c><mjx-c></mjx-c></mjx-mn><mjx-script style=\"vertical-align: 0.393em;\"><mjx-mo data-semantic- data-semantic-parent=\"3\" data-semantic-role=\"multiplication\" data-semantic-type=\"operator\" size=\"s\"><mjx-c></mjx-c></mjx-mo></mjx-script></mjx-msup></mjx-mrow></mjx-semantics></mjx-math><mjx-assistive-mml display=\"inline\" unselectable=\"on\"><math altimg=\"urn:x-wiley:25130390:media:adts202301212:adts202301212-math-0005\" display=\"inline\" location=\"graphic/adts202301212-math-0005.png\" xmlns=\"http://www.w3.org/1998/Math/MathML\"><semantics><mrow data-semantic-=\"\" data-semantic-children=\"3\" data-semantic-content=\"0\" data-semantic-role=\"addition\" data-semantic-speech=\"plus or minus 20 Superscript ring\" data-semantic-type=\"prefixop\"><mo data-semantic-=\"\" data-semantic-operator=\"prefixop,±\" data-semantic-parent=\"4\" data-semantic-role=\"addition\" data-semantic-type=\"operator\">±</mo><msup data-semantic-=\"\" data-semantic-children=\"1,2\" data-semantic-parent=\"4\" data-semantic-role=\"integer\" data-semantic-type=\"superscript\"><mn data-semantic-=\"\" data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"normal\" data-semantic-parent=\"3\" data-semantic-role=\"integer\" data-semantic-type=\"number\">20</mn><mo data-semantic-=\"\" data-semantic-parent=\"3\" data-semantic-role=\"multiplication\" data-semantic-type=\"operator\">∘</mo></msup></mrow>$\\pm 20^{\\circ }$</annotation></semantics></math></mjx-assistive-mml></mjx-container> for ZnP-COPV and <span data-altimg=\"/cms/asset/5e69988e-403b-4323-b9df-a741226bad16/adts202301212-math-0006.png\"></span><mjx-container ctxtmenu_counter=\"59\" ctxtmenu_oldtabindex=\"1\" jax=\"CHTML\" role=\"application\" sre-explorer- style=\"font-size: 103%; position: relative;\" tabindex=\"0\"><mjx-math aria-hidden=\"true\" location=\"graphic/adts202301212-math-0006.png\"><mjx-semantics><mjx-mrow data-semantic-children=\"3\" data-semantic-content=\"0\" data-semantic- data-semantic-role=\"addition\" data-semantic-speech=\"plus or minus 30 Superscript ring\" data-semantic-type=\"prefixop\"><mjx-mo data-semantic- data-semantic-operator=\"prefixop,±\" data-semantic-parent=\"4\" data-semantic-role=\"addition\" data-semantic-type=\"operator\" rspace=\"1\" style=\"margin-left: 0.056em;\"><mjx-c></mjx-c></mjx-mo><mjx-msup data-semantic-children=\"1,2\" data-semantic- data-semantic-parent=\"4\" data-semantic-role=\"integer\" data-semantic-type=\"superscript\"><mjx-mn data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"normal\" data-semantic- data-semantic-parent=\"3\" data-semantic-role=\"integer\" data-semantic-type=\"number\"><mjx-c></mjx-c><mjx-c></mjx-c></mjx-mn><mjx-script style=\"vertical-align: 0.393em;\"><mjx-mo data-semantic- data-semantic-parent=\"3\" data-semantic-role=\"multiplication\" data-semantic-type=\"operator\" size=\"s\"><mjx-c></mjx-c></mjx-mo></mjx-script></mjx-msup></mjx-mrow></mjx-semantics></mjx-math><mjx-assistive-mml display=\"inline\" unselectable=\"on\"><math altimg=\"urn:x-wiley:25130390:media:adts202301212:adts202301212-math-0006\" display=\"inline\" location=\"graphic/adts202301212-math-0006.png\" xmlns=\"http://www.w3.org/1998/Math/MathML\"><semantics><mrow data-semantic-=\"\" data-semantic-children=\"3\" data-semantic-content=\"0\" data-semantic-role=\"addition\" data-semantic-speech=\"plus or minus 30 Superscript ring\" data-semantic-type=\"prefixop\"><mo data-semantic-=\"\" data-semantic-operator=\"prefixop,±\" data-semantic-parent=\"4\" data-semantic-role=\"addition\" data-semantic-type=\"operator\">±</mo><msup data-semantic-=\"\" data-semantic-children=\"1,2\" data-semantic-parent=\"4\" data-semantic-role=\"integer\" data-semantic-type=\"superscript\"><mn data-semantic-=\"\" data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"normal\" data-semantic-parent=\"3\" data-semantic-role=\"integer\" data-semantic-type=\"number\">30</mn><mo data-semantic-=\"\" data-semantic-parent=\"3\" data-semantic-role=\"multiplication\" data-semantic-type=\"operator\">∘</mo></msup></mrow>$\\pm 30^{\\circ }$</annotation></semantics></math></mjx-assistive-mml></mjx-container> for COPV-<span data-altimg=\"/cms/asset/8a2f82bf-9cbd-4d3d-9ae0-9f31df9021e1/adts202301212-math-0007.png\"></span><mjx-container ctxtmenu_counter=\"60\" ctxtmenu_oldtabindex=\"1\" jax=\"CHTML\" role=\"application\" sre-explorer- style=\"font-size: 103%; position: relative;\" tabindex=\"0\"><mjx-math aria-hidden=\"true\" location=\"graphic/adts202301212-math-0007.png\"><mjx-semantics><mjx-msub data-semantic-children=\"0,1\" data-semantic- data-semantic-role=\"latinletter\" data-semantic-speech=\"normal upper C 60\" data-semantic-type=\"subscript\"><mjx-mi data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"normal\" data-semantic- data-semantic-parent=\"2\" data-semantic-role=\"latinletter\" data-semantic-type=\"identifier\"><mjx-c></mjx-c></mjx-mi><mjx-script style=\"vertical-align: -0.15em;\"><mjx-mn data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"normal\" data-semantic- data-semantic-parent=\"2\" data-semantic-role=\"integer\" data-semantic-type=\"number\" size=\"s\"><mjx-c></mjx-c><mjx-c></mjx-c></mjx-mn></mjx-script></mjx-msub></mjx-semantics></mjx-math><mjx-assistive-mml display=\"inline\" unselectable=\"on\"><math altimg=\"urn:x-wiley:25130390:media:adts202301212:adts202301212-math-0007\" display=\"inline\" location=\"graphic/adts202301212-math-0007.png\" xmlns=\"http://www.w3.org/1998/Math/MathML\"><semantics><msub data-semantic-=\"\" data-semantic-children=\"0,1\" data-semantic-role=\"latinletter\" data-semantic-speech=\"normal upper C 60\" data-semantic-type=\"subscript\"><mi data-semantic-=\"\" data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"normal\" data-semantic-parent=\"2\" data-semantic-role=\"latinletter\" data-semantic-type=\"identifier\" mathvariant=\"normal\">C</mi><mn data-semantic-=\"\" data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"normal\" data-semantic-parent=\"2\" data-semantic-role=\"integer\" data-semantic-type=\"number\">60</mn></msub>${\\rm C}_{60}$</annotation></semantics></math></mjx-assistive-mml></mjx-container>) after thermalization showcases COPV's ability to maintain structural rigidity over time, aligning with the concept of effective <span data-altimg=\"/cms/asset/b85a4da5-4ce0-4f53-97d6-c4db30fc66ca/adts202301212-math-0008.png\"></span><mjx-container ctxtmenu_counter=\"61\" ctxtmenu_oldtabindex=\"1\" jax=\"CHTML\" role=\"application\" sre-explorer- style=\"font-size: 103%; position: relative;\" tabindex=\"0\"><mjx-math aria-hidden=\"true\" location=\"graphic/adts202301212-math-0008.png\"><mjx-semantics><mjx-mi data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"italic\" data-semantic- data-semantic-role=\"greekletter\" data-semantic-speech=\"pi\" data-semantic-type=\"identifier\"><mjx-c></mjx-c></mjx-mi></mjx-semantics></mjx-math><mjx-assistive-mml display=\"inline\" unselectable=\"on\"><math altimg=\"urn:x-wiley:25130390:media:adts202301212:adts202301212-math-0008\" display=\"inline\" location=\"graphic/adts202301212-math-0008.png\" xmlns=\"http://www.w3.org/1998/Math/MathML\"><semantics><mi data-semantic-=\"\" data-semantic-annotation=\"clearspeak:simple\" data-semantic-font=\"italic\" data-semantic-role=\"greekletter\" data-semantic-speech=\"pi\" data-semantic-type=\"identifier\">π</mi>$\\pi$</annotation></semantics></math></mjx-assistive-mml></mjx-container>-conjugation. Finally, through the lens of time dependent (TD)-DFT, the dynamic evolution of the HOMO–LUMO energy gap, TD-DFT excitation energies and oscillator strengths are explored as the molecular structure transforms over time. The observed energy gap variation underscores the molecule's adaptability in the face of structural modifications, hinting at an intriguing connection between structural stability and enhanced electronic properties. The research provides a comprehensive understanding of the intricate interplay between conformational dynamics and electronic attributes in organic semiconductors, providing quantitative insights crucial for designing stable, high-performance materials for cutting-edge optoelectronic applications and helping advance the collective understanding of sustainable energy conversion.","PeriodicalId":7219,"journal":{"name":"Advanced Theory and Simulations","volume":"41 1","pages":""},"PeriodicalIF":2.9000,"publicationDate":"2024-10-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Advanced Theory and Simulations","FirstCategoryId":"5","ListUrlMain":"https://doi.org/10.1002/adts.202301212","RegionNum":4,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"MULTIDISCIPLINARY SCIENCES","Score":null,"Total":0}
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Abstract

This research explores the electronic properties and conformational dynamics of the ZnP-COPV-C60${\rm C}_{60}$ (Zinc Porphyrin - Carbon bridged Oligo Phenylenevinylene - Fullerene) organic semiconductor via specialized Density Functional Theory (DFT) and Molecular Dynamics (MD) computational techniques. First, through DFT calculations, essential HOMO (Highest Occupied Molecular Orbital), LUMO (Lowest Unoccupied Molecular Orbital), and Molecular Electrostatic Potential (MEP) electronic attributes are meticulously dissected providing insights into the intricate charge transfer processes between the constituent donor-acceptor moieties. Furthermore, MD simulations are employed to unveil the molecular system's multifaceted conformational flexibility and stability. The Root-mean-squared deviation (RMSD), end-to-end distance, and torsional angles quantitative analysis of conformational attributes support the carbon-bridged oligo-phenylenevinylene (COPV) molecular wire's π$\pi$-skeleton planar and rigid conformation. This minimal end-to-end distance variation (within ±1$\pm 1$ Å) compared to the initially extended structure and the constrained torsional motion (within ±20$\pm 20^{\circ }$ for ZnP-COPV and ±30$\pm 30^{\circ }$ for COPV-C60${\rm C}_{60}$) after thermalization showcases COPV's ability to maintain structural rigidity over time, aligning with the concept of effective π$\pi$-conjugation. Finally, through the lens of time dependent (TD)-DFT, the dynamic evolution of the HOMO–LUMO energy gap, TD-DFT excitation energies and oscillator strengths are explored as the molecular structure transforms over time. The observed energy gap variation underscores the molecule's adaptability in the face of structural modifications, hinting at an intriguing connection between structural stability and enhanced electronic properties. The research provides a comprehensive understanding of the intricate interplay between conformational dynamics and electronic attributes in organic semiconductors, providing quantitative insights crucial for designing stable, high-performance materials for cutting-edge optoelectronic applications and helping advance the collective understanding of sustainable energy conversion.

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探索有机供体-桥-受体分子体系的电子和构象属性
这项研究通过专门的密度泛函理论(DFT)和分子动力学(MD)计算技术,探索了 ZnP-COPV-C60${rm C}_{60}$(卟啉锌-碳桥低聚亚苯基乙烯-富勒烯)有机半导体的电子特性和构象动力学。首先,通过 DFT 计算,对基本的 HOMO(最高占位分子轨道)、LUMO(最低未占位分子轨道)和分子静电势 (MEP) 电子属性进行了细致的剖析,从而深入了解了组成供体-受体分子之间错综复杂的电荷转移过程。此外,还利用 MD 模拟揭示了分子体系多方面的构象灵活性和稳定性。构象属性的均方根偏差(RMSD)、端到端距离和扭转角定量分析支持碳杂化低聚亚苯基乙烯(COPV)分子线的π$\pi$骨架平面和刚性构象。与最初的扩展结构和热化后的受限扭转运动(ZnP-COPV 为 ±20∘$pm 20^{circ }$,COPV-C60 为 ±30∘$pm 30^{circ }$)相比,COPV 的端到端距离变化极小(在 ±1$pm 1$ Å 以内),这表明 COPV 能够长期保持结构的刚性、与有效π$\pi$-共轭的概念相一致。最后,通过时间相关(TD)-DFT 的视角,探讨了分子结构随时间变化时 HOMO-LUMO 能隙、TD-DFT 激发能和振荡器强度的动态演化。观察到的能隙变化强调了分子在面对结构变化时的适应性,暗示了结构稳定性与增强的电子特性之间的有趣联系。这项研究全面揭示了有机半导体中构象动力学与电子属性之间错综复杂的相互作用,为设计用于尖端光电应用的稳定、高性能材料提供了至关重要的定量见解,并有助于推进对可持续能源转换的集体认识。
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Advanced Theory and Simulations
Advanced Theory and Simulations Multidisciplinary-Multidisciplinary
CiteScore
5.50
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3.00%
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221
期刊介绍: Advanced Theory and Simulations is an interdisciplinary, international, English-language journal that publishes high-quality scientific results focusing on the development and application of theoretical methods, modeling and simulation approaches in all natural science and medicine areas, including: materials, chemistry, condensed matter physics engineering, energy life science, biology, medicine atmospheric/environmental science, climate science planetary science, astronomy, cosmology method development, numerical methods, statistics
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