Design of a Genetically Programmable and Customizable Protein Scaffolding System for the Hierarchical Assembly of Robust, Functional Macroscale Materials.

IF 3.7 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS ACS Synthetic Biology Pub Date : 2024-10-31 DOI:10.1021/acssynbio.4c00587
Ruijie Zhang, Sun-Young Kang, François Gaascht, Eliana L Peña, Claudia Schmidt-Dannert
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Abstract

Inspired by the properties of natural protein-based biomaterials, protein nanomaterials are increasingly designed with natural or engineered peptides or with protein building blocks. Few examples describe the design of functional protein-based materials for biotechnological applications that can be readily manufactured, are amenable to functionalization, and exhibit robust assembly properties for macroscale material formation. Here, we designed a protein-scaffolding system that self-assembles into robust, macroscale materials suitable for in vitro cell-free applications. By controlling the coexpression in Escherichia coli of self-assembling scaffold building blocks with and without modifications for covalent attachment of cross-linking cargo proteins, hybrid scaffolds with spatially organized conjugation sites are overproduced that can be readily isolated. Cargo proteins, including enzymes, are rapidly cross-linked onto scaffolds for the formation of functional materials. We show that these materials can be used for the in vitro operation of a coimmobilized two-enzyme reaction and that the protein material can be recovered and reused. We believe that this work will provide a versatile platform for the design and scalable production of functional materials with customizable properties and the robustness required for biotechnological applications.

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设计一种基因可编程和可定制的蛋白质支架系统,用于分层组装稳健的功能性宏观材料。
受天然蛋白质生物材料特性的启发,越来越多的蛋白质纳米材料采用天然肽或工程肽或蛋白质构件进行设计。很少有实例能说明如何为生物技术应用设计基于蛋白质的功能性材料,这些材料可随时制造,易于功能化,并在形成宏观材料时表现出强大的组装特性。在这里,我们设计了一种蛋白质支架系统,它能自我组装成坚固耐用的宏观材料,适合体外无细胞应用。通过控制自组装支架构建模块在大肠杆菌中的共表达,并对交联货物蛋白进行共价连接修饰或不进行共价连接修饰,就能过量生产出具有空间组织连接位点的混合支架,并可随时分离出来。货物蛋白(包括酶)可快速交联到支架上,形成功能材料。我们的研究表明,这些材料可用于共固定双酶反应的体外操作,而且蛋白质材料可以回收和重复使用。我们相信,这项工作将为设计和规模化生产具有可定制特性和生物技术应用所需的稳健性的功能材料提供一个多功能平台。
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来源期刊
CiteScore
8.00
自引率
10.60%
发文量
380
审稿时长
6-12 weeks
期刊介绍: The journal is particularly interested in studies on the design and synthesis of new genetic circuits and gene products; computational methods in the design of systems; and integrative applied approaches to understanding disease and metabolism. Topics may include, but are not limited to: Design and optimization of genetic systems Genetic circuit design and their principles for their organization into programs Computational methods to aid the design of genetic systems Experimental methods to quantify genetic parts, circuits, and metabolic fluxes Genetic parts libraries: their creation, analysis, and ontological representation Protein engineering including computational design Metabolic engineering and cellular manufacturing, including biomass conversion Natural product access, engineering, and production Creative and innovative applications of cellular programming Medical applications, tissue engineering, and the programming of therapeutic cells Minimal cell design and construction Genomics and genome replacement strategies Viral engineering Automated and robotic assembly platforms for synthetic biology DNA synthesis methodologies Metagenomics and synthetic metagenomic analysis Bioinformatics applied to gene discovery, chemoinformatics, and pathway construction Gene optimization Methods for genome-scale measurements of transcription and metabolomics Systems biology and methods to integrate multiple data sources in vitro and cell-free synthetic biology and molecular programming Nucleic acid engineering.
期刊最新文献
Cohesive Living Bacterial Films with Tunable Mechanical Properties from Cell Surface Protein Display. A Plug-and-Play T7 Expression System for Heterologous Production of Lanthipeptides in Bacillus subtilis. Design of a Genetically Programmable and Customizable Protein Scaffolding System for the Hierarchical Assembly of Robust, Functional Macroscale Materials. Recent Advances in Genetic Engineering Strategies of Sinorhizobium meliloti. Using Cupriavidus necator H16 to Provide a Roadmap for Increasing Electroporation Efficiency in Nonmodel Bacteria.
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