Elucidating ATP's role as solubilizer of biomolecular aggregate.

IF 6.4 1区 生物学 Q1 BIOLOGY eLife Pub Date : 2024-10-30 DOI:10.7554/eLife.99150
Susmita Sarkar, Saurabh Gupta, Chiranjit Mahato, Dibyendu Das, Jagannath Mondal
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Abstract

Proteins occurring in significantly high concentrations in cellular environments (over 100 mg/ml) and functioning in crowded cytoplasm, often face the prodigious challenges of aggregation which are the pathological hallmark of aging and are critically responsible for a wide spectrum of rising human diseases. Here, we combine a joint-venture of complementary wet-lab experiment and molecular simulation to discern the potential ability of adenosine triphosphate (ATP) as solubilizer of protein aggregates. We show that ATP prevents both condensation of aggregation-prone intrinsically disordered protein Aβ40 and promotes dissolution of preformed aggregates. Computer simulation links ATP's solubilizing role to its ability to modulate protein's structural plasticity by unwinding protein conformation. We show that ATP is positioned as a superior biological solubilizer of protein aggregates over traditional chemical hydrotropes, potentially holding promises in therapeutic interventions in protein-aggregation-related diseases. Going beyond its conventional activity as energy currency, the amphiphilic nature of ATP enables its protein-specific interaction that would enhance ATP's efficiency in cellular processes.

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阐明 ATP 作为生物分子聚合体增溶剂的作用。
蛋白质在细胞环境中的浓度非常高(超过 100 毫克/毫升),而且在拥挤的细胞质中发挥作用,因此经常面临聚集的巨大挑战,而聚集是衰老的病理标志,也是导致人类疾病不断增多的重要原因。在这里,我们结合了互补性湿实验室实验和分子模拟,来揭示三磷酸腺苷(ATP)作为蛋白质聚集体增溶剂的潜在能力。我们的研究表明,三磷酸腺苷既能防止易发生聚集的内在无序蛋白 Aβ40 的凝结,又能促进已形成的聚集体的溶解。计算机模拟将 ATP 的增溶作用与其通过解开蛋白质构象来调节蛋白质结构可塑性的能力联系起来。我们的研究表明,与传统的化学加氢物相比,ATP 是蛋白质聚集体的高级生物增溶剂,有望用于治疗与蛋白质聚集相关的疾病。除了作为能量货币的传统活性外,ATP 的两亲性质还能与蛋白质发生特异性相互作用,从而提高 ATP 在细胞过程中的效率。
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来源期刊
eLife
eLife BIOLOGY-
CiteScore
12.90
自引率
3.90%
发文量
3122
审稿时长
17 weeks
期刊介绍: eLife is a distinguished, not-for-profit, peer-reviewed open access scientific journal that specializes in the fields of biomedical and life sciences. eLife is known for its selective publication process, which includes a variety of article types such as: Research Articles: Detailed reports of original research findings. Short Reports: Concise presentations of significant findings that do not warrant a full-length research article. Tools and Resources: Descriptions of new tools, technologies, or resources that facilitate scientific research. Research Advances: Brief reports on significant scientific advancements that have immediate implications for the field. Scientific Correspondence: Short communications that comment on or provide additional information related to published articles. Review Articles: Comprehensive overviews of a specific topic or field within the life sciences.
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