Ensemble Monte Carlo calculations with five novel moves

IF 7.2 2区 物理与天体物理 Q1 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Computer Physics Communications Pub Date : 2024-11-05 DOI:10.1016/j.cpc.2024.109424
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Abstract

We introduce five novel types of Monte Carlo (MC) moves that brings the number of moves of ensemble MC calculations from three to eight. So far such calculations have relied on affine invariant stretch moves that were originally introduced by Christen (2007) [8], walk moves by Goodman and Weare (2010) [16] and quadratic moves by Militzer (2023) [31], [32]. Ensemble MC methods have been very popular because they harness information about the fitness landscape from a population of walkers rather than relying on expert knowledge. Here we modified the affine method and employed a simplex of points to set the stretch direction. We adopt the simplex concept to quadratic moves. We also generalize quadratic moves to arbitrary order. Finally, we introduce directed moves that employ the values of the probability density while all other types of moves rely solely on the location of the walkers. We apply all algorithms to the Rosenbrock density in 2 and 20 dimensions and to the ring potential in 12 and 24 dimensions. We evaluate their efficiency by comparing error bars, autocorrelation time, travel time, and the level of cohesion that measures whether any walkers were left behind. Our code is open source.
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用五种新动作进行集合蒙特卡洛计算
我们引入了五种新的蒙特卡洛(MC)移动,使集合 MC 计算的移动次数从三次增加到八次。迄今为止,这类计算依赖于Christen(2007)[8]最初提出的仿射不变伸展移动、Goodman和Weare(2010)[16]提出的行走移动以及Militzer(2023)[31]、[32]提出的二次移动。集合式 MC 方法非常流行,因为它们利用的是从步行者群体中获得的有关适应度景观的信息,而不是依赖专家知识。在这里,我们对仿射方法进行了修改,采用了一个简单点来设定拉伸方向。我们将单纯形概念应用于二次移动。我们还将二次移动推广到任意顺序。最后,我们引入了利用概率密度值的有向移动,而所有其他类型的移动仅依赖于步行者的位置。我们将所有算法应用于 2 维和 20 维的罗森布克密度以及 12 维和 24 维的环势。我们通过比较误差条、自相关时间、移动时间以及衡量是否有步行者落在后面的内聚程度来评估它们的效率。我们的代码是开源的。
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来源期刊
Computer Physics Communications
Computer Physics Communications 物理-计算机:跨学科应用
CiteScore
12.10
自引率
3.20%
发文量
287
审稿时长
5.3 months
期刊介绍: The focus of CPC is on contemporary computational methods and techniques and their implementation, the effectiveness of which will normally be evidenced by the author(s) within the context of a substantive problem in physics. Within this setting CPC publishes two types of paper. Computer Programs in Physics (CPiP) These papers describe significant computer programs to be archived in the CPC Program Library which is held in the Mendeley Data repository. The submitted software must be covered by an approved open source licence. Papers and associated computer programs that address a problem of contemporary interest in physics that cannot be solved by current software are particularly encouraged. Computational Physics Papers (CP) These are research papers in, but are not limited to, the following themes across computational physics and related disciplines. mathematical and numerical methods and algorithms; computational models including those associated with the design, control and analysis of experiments; and algebraic computation. Each will normally include software implementation and performance details. The software implementation should, ideally, be available via GitHub, Zenodo or an institutional repository.In addition, research papers on the impact of advanced computer architecture and special purpose computers on computing in the physical sciences and software topics related to, and of importance in, the physical sciences may be considered.
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