Investigating the differential structural organization and gene expression regulatory networks of lamin A Ig fold domain mutants of muscular dystrophy.

IF 4.4 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Biochemical Journal Pub Date : 2024-11-07 DOI:10.1042/BCJ20240474
Subarna Dutta, Vikas Kumar, Arnab Barua, Madavan Vasudevan
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Abstract

Lamins form a proteinaceous meshwork as a major structural component of the nucleus. Lamins, along with their interactors, act as determinants for chromatin organization throughout the nucleus. The major dominant missense mutations responsible for autosomal dominant forms of muscular dystrophies reside in the Ig fold domain of lamin A. However, how lamin A contributes to the distribution of heterochromatin and balances euchromatin, and how it relocates epigenetic marks to shape chromatin states, remains poorly defined, making it difficult to draw conclusions about the prognosis of lamin A-mediated muscular dystrophies.In the first part of this report, we identified the in-vitro organization of full-length lamin A proteins due to two well-documented Ig LMNA mutations, R453W and W514R. We further demonstrated that both lamin A/C mutant cells predominantly expressed nucleoplasmic aggregates. Labelling specific markers of epigenetics allowed correlation of lamin A mutations with epigenetic mechanisms. In addition to manipulating epigenetic mechanisms, our proteomic studies traced diverse expressions of transcription regulators, RNA synthesis and processing proteins, protein translation components, and posttranslational modifications. These data suggest severe perturbations in targeting other proteins to the nucleus.

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研究肌肉萎缩症的层粘连A Ig折叠结构域突变体的不同结构组织和基因表达调控网络。
作为细胞核的主要结构成分,绵蛋白形成了一个蛋白网状结构。染色质蛋白及其相互作用体是整个细胞核染色质组织的决定因素。然而,层粘连蛋白 A 是如何促进异染色质的分布和平衡染色质的,又是如何重新定位表观遗传标记以形成染色质状态的,这些问题仍未得到很好的界定,因此很难就层粘连蛋白 A 介导的肌肉萎缩症的预后得出结论。在本报告的第一部分,我们确定了全长层粘连蛋白 A 的体外组织是由两种有据可查的 Ig LMNA 突变(R453W 和 W514R)引起的。我们进一步证明,这两种片层 A/C突变细胞主要表达核质聚集体。通过标记表观遗传学的特定标记物,可以将板层片 A 突变与表观遗传学机制联系起来。除了表观遗传学机制,我们的蛋白质组学研究还追踪了转录调节因子、RNA合成和加工蛋白、蛋白质翻译元件和翻译后修饰的不同表达。这些数据表明,其他蛋白质靶向细胞核的过程受到了严重干扰。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Biochemical Journal
Biochemical Journal 生物-生化与分子生物学
CiteScore
8.00
自引率
0.00%
发文量
255
审稿时长
1 months
期刊介绍: Exploring the molecular mechanisms that underpin key biological processes, the Biochemical Journal is a leading bioscience journal publishing high-impact scientific research papers and reviews on the latest advances and new mechanistic concepts in the fields of biochemistry, cellular biosciences and molecular biology. The Journal and its Editorial Board are committed to publishing work that provides a significant advance to current understanding or mechanistic insights; studies that go beyond observational work using in vitro and/or in vivo approaches are welcomed. Painless publishing: All papers undergo a rigorous peer review process; however, the Editorial Board is committed to ensuring that, if revisions are recommended, extra experiments not necessary to the paper will not be asked for. Areas covered in the journal include: Cell biology Chemical biology Energy processes Gene expression and regulation Mechanisms of disease Metabolism Molecular structure and function Plant biology Signalling
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