Localizing the seizure onset zone and predicting the surgery outcomes in patients with drug-resistant epilepsy: A new approach based on the causal network

IF 4.9 2区 医学 Q1 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Computer methods and programs in biomedicine Pub Date : 2024-11-08 DOI:10.1016/j.cmpb.2024.108483
Mingming Chen, Kunlin Guo, Kai Lu, Kunying Meng, Junfeng Lu, Yajing Pang, Lipeng Zhang, Yuxia Hu, Renping Yu, Rui Zhang
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Abstract

Background and Objective:

Accurate localization of the seizure onset zone (SOZ) is crucial for surgical treatment in patients with drug-resistant epilepsy (DRE). However, clinical identification of SOZ often relies on physician experience and has a certain subjectivity. Therefore, it is emergent to develop quantitative computational tools to assist clinicians in identifying SOZ.

Methods:

We conduct a retrospective study on intracranial electroencephalography (iEEG) data from 46 patients with DRE. The interactions between different brain regions are quantified by using the phase transfer entropy (PTE), based on which the causal influence index (CII) is proposed to quantify the degree of influence of nodes on the network. Subsequently, the features extracted by the CII are used to construct a random forest classification model, which the performance in identifying SOZ and the generalizability are validated in patients with successful surgeries. Then, based on the CII features of the clinically labeled SOZ, a logistic regression prediction model is constructed to predict the probability of surgical success. The statistical analysis between patients with successful and failed surgery is conducted with the Mann–Whitney U test. Finally, the consistency between the predicted SOZ and the clinically labeled SOZ is verified across different Engel classes.

Results:

The classification model combining the low-frequency and high-frequency features can achieve an accuracy of 82.18% (sensitivity: 85.01%, specificity: 79.69%) and an area under curve (AUC) of 0.90 in identifying SOZ. Furthermore, the model exhibits strong generalizability in identifying SOZ in patients with MRI lesional and non-lesional, as well as those implanted with electrocorticography (ECOG) and stereotactic EEG (SEEG) electrodes. Moreover, the prediction model could achieve an average accuracy of 79.8% and an AUC of 0.84. Of note, the prediction of surgical success probability is significant between patients with successful and failed surgeries (P<0.001). Correspondingly, the highest consistency between model-predicted SOZ and clinically labeled SOZ can be observed in patients with successful surgeries, but this consistency gradually decreases with increasing Engel classes.

Conclusions:

These results demonstrate that the CII may be a potential biomarker for identifying the SOZ in patients with DRE, which may provide a new perspective for the treatment of epilepsy.
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确定耐药性癫痫患者的发作起始区并预测手术结果:基于因果网络的新方法。
背景和目的:准确定位癫痫发作区(SOZ)对于耐药性癫痫(DRE)患者的手术治疗至关重要。然而,临床上对 SOZ 的识别往往依赖于医生的经验,具有一定的主观性。因此,开发定量计算工具来协助临床医生识别SOZ成为当务之急:我们对 46 名 DRE 患者的颅内脑电图(iEEG)数据进行了回顾性研究。利用相位传递熵(PTE)量化不同脑区之间的相互作用,并在此基础上提出因果影响指数(CII),以量化节点对网络的影响程度。随后,利用 CII 提取的特征构建随机森林分类模型,并在手术成功的患者中验证其识别 SOZ 的性能和普适性。然后,根据临床标记的 SOZ 的 CII 特征,构建逻辑回归预测模型,预测手术成功的概率。通过 Mann-Whitney U 检验对手术成功和失败的患者进行统计分析。最后,在不同的恩格尔等级中验证了预测的 SOZ 与临床标记的 SOZ 之间的一致性:结果:结合低频和高频特征的分类模型在识别 SOZ 方面的准确率为 82.18%(灵敏度:85.01%,特异性:79.69%),曲线下面积(AUC)为 0.90。此外,该模型在识别磁共振成像病变和非病变患者,以及植入皮层电图(ECOG)和立体定向脑电图(SEEG)电极的患者的 SOZ 方面具有很强的普适性。此外,该预测模型的平均准确率为 79.8%,AUC 为 0.84。值得注意的是,在手术成功和手术失败的患者之间,手术成功概率的预测结果具有显著性(结论:CII 预测的手术成功概率与手术失败概率之间具有显著性差异):这些结果表明,CII可能是识别DRE患者SOZ的潜在生物标志物,为癫痫治疗提供了新的视角。
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来源期刊
Computer methods and programs in biomedicine
Computer methods and programs in biomedicine 工程技术-工程:生物医学
CiteScore
12.30
自引率
6.60%
发文量
601
审稿时长
135 days
期刊介绍: To encourage the development of formal computing methods, and their application in biomedical research and medical practice, by illustration of fundamental principles in biomedical informatics research; to stimulate basic research into application software design; to report the state of research of biomedical information processing projects; to report new computer methodologies applied in biomedical areas; the eventual distribution of demonstrable software to avoid duplication of effort; to provide a forum for discussion and improvement of existing software; to optimize contact between national organizations and regional user groups by promoting an international exchange of information on formal methods, standards and software in biomedicine. Computer Methods and Programs in Biomedicine covers computing methodology and software systems derived from computing science for implementation in all aspects of biomedical research and medical practice. It is designed to serve: biochemists; biologists; geneticists; immunologists; neuroscientists; pharmacologists; toxicologists; clinicians; epidemiologists; psychiatrists; psychologists; cardiologists; chemists; (radio)physicists; computer scientists; programmers and systems analysts; biomedical, clinical, electrical and other engineers; teachers of medical informatics and users of educational software.
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Editorial Board A comprehensive benchmarking of a U-Net based model for midbrain auto-segmentation on transcranial sonography DeepForest-HTP: A novel deep forest approach for predicting antihypertensive peptides Positional encoding-guided transformer-based multiple instance learning for histopathology whole slide images classification Localizing the seizure onset zone and predicting the surgery outcomes in patients with drug-resistant epilepsy: A new approach based on the causal network
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