The goat PRLR gene: mRNA expression, association analysis of InDel variants with body weight and growth traits

IF 2.4 3区 生物学 Q2 GENETICS & HEREDITY Gene Pub Date : 2024-11-08 DOI:10.1016/j.gene.2024.149081
Congliang Wang , Zhaofei Ren , Xiaoyu Liu , Xiaoyue Song , Lei Shi , Huaiyan Kang , Dong Ma , Xianyong Lan , Lei Qu , Haijing Zhu , Jinlian Hua
{"title":"The goat PRLR gene: mRNA expression, association analysis of InDel variants with body weight and growth traits","authors":"Congliang Wang ,&nbsp;Zhaofei Ren ,&nbsp;Xiaoyu Liu ,&nbsp;Xiaoyue Song ,&nbsp;Lei Shi ,&nbsp;Huaiyan Kang ,&nbsp;Dong Ma ,&nbsp;Xianyong Lan ,&nbsp;Lei Qu ,&nbsp;Haijing Zhu ,&nbsp;Jinlian Hua","doi":"10.1016/j.gene.2024.149081","DOIUrl":null,"url":null,"abstract":"<div><div>Prolactin is a single-chain peptide hormone produced by the anterior pituitary gland and plays an important role in the reproductive development of mammals. Therefore, we investigated the expression of the <em>PRLR</em> gene in various goat tissues during distinct developmental stages, as well as the correlation between the 16 bp InDel and growth traits in goats. The study findings demonstrated a consistent expression and distribution of <em>PRLR</em> in both yearling and adult goat tissues, with the highest levels observed in the testis. Association analysis showed that in the yearling IMWC goat population (n = 463), this 16 bp InDel variation was associated with body weight (<em>P</em> = 0.026), body height (<em>P</em> = 0.005), body length (<em>P</em> = 0.008), heart girth (<em>P</em> = 0.001), chest depth (P = 0.000075), and chest width (<em>P</em> = 0.005); In the adult IMWC goat population (<em>n</em> = 211), the 16 bp InDel variation was associated with body height (<em>P</em> = 0.011), height across the hip (<em>P</em> = 0.0003), chest depth (<em>P</em> = 0.001), and cashmere fineness (<em>P</em> = 0.022); In all IMWC goat populations (<em>n</em> = 674), this 16 bp InDel was related to body weight (<em>P</em> = 0.042), body height (<em>P</em> = 0.001), body length (<em>P</em> = 0.013), heart girth (<em>P</em> = 0.012), height across the hip (<em>P</em> = 0.038), chest depth (<em>P</em> = 0.001), and chest width (<em>P</em> = 0.006). The bioinformatics analysis has revealed that the significant impact of a 16 bp InDel on growth traits in goats may be attributed to its specific binding to the transcription factors AP-2α and Sp1. These findings suggest that this genetic variant plays a crucial role in the growth and development of goats, making it a valuable DNA marker for selecting goats with superior growth traits.</div></div>","PeriodicalId":12499,"journal":{"name":"Gene","volume":"935 ","pages":"Article 149081"},"PeriodicalIF":2.4000,"publicationDate":"2024-11-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Gene","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0378111924009624","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
引用次数: 0

Abstract

Prolactin is a single-chain peptide hormone produced by the anterior pituitary gland and plays an important role in the reproductive development of mammals. Therefore, we investigated the expression of the PRLR gene in various goat tissues during distinct developmental stages, as well as the correlation between the 16 bp InDel and growth traits in goats. The study findings demonstrated a consistent expression and distribution of PRLR in both yearling and adult goat tissues, with the highest levels observed in the testis. Association analysis showed that in the yearling IMWC goat population (n = 463), this 16 bp InDel variation was associated with body weight (P = 0.026), body height (P = 0.005), body length (P = 0.008), heart girth (P = 0.001), chest depth (P = 0.000075), and chest width (P = 0.005); In the adult IMWC goat population (n = 211), the 16 bp InDel variation was associated with body height (P = 0.011), height across the hip (P = 0.0003), chest depth (P = 0.001), and cashmere fineness (P = 0.022); In all IMWC goat populations (n = 674), this 16 bp InDel was related to body weight (P = 0.042), body height (P = 0.001), body length (P = 0.013), heart girth (P = 0.012), height across the hip (P = 0.038), chest depth (P = 0.001), and chest width (P = 0.006). The bioinformatics analysis has revealed that the significant impact of a 16 bp InDel on growth traits in goats may be attributed to its specific binding to the transcription factors AP-2α and Sp1. These findings suggest that this genetic variant plays a crucial role in the growth and development of goats, making it a valuable DNA marker for selecting goats with superior growth traits.
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
山羊 PRLR 基因:mRNA 表达、InDel 变异与体重和生长性状的关联分析。
催乳素是一种由垂体前叶分泌的单链肽类激素,在哺乳动物的生殖发育过程中发挥着重要作用。因此,我们研究了不同发育阶段山羊不同组织中 PRLR 基因的表达,以及 16 bp InDel 与山羊生长性状的相关性。研究结果表明,PRLR 在一岁山羊和成年山羊组织中的表达和分布一致,在睾丸中的表达水平最高。关联分析表明,在一岁的 IMWC 山羊群体(n = 463)中,16 bp InDel 变异与体重(P = 0.026)、体高(P = 0.005)、体长(P = 0.008)、心宽(P = 0.001)、胸深(P = 0.000075)和胸宽(P = 0.005);在成年 IMWC 山羊群体(n = 211)中,16 bp InDel 变异与体高(P = 0.011)、跨臀高(P = 0.0003)、胸深(P = 0.001)和羊绒细度(P = 0.022)相关;在所有 IMWC 山羊群体(n = 674)中,16 bp InDel 与体重(P = 0.042)、体高(P = 0.001)、体长(P = 0.013)、心宽(P = 0.012)、跨髋高(P = 0.038)、胸深(P = 0.001)和胸宽(P = 0.006)有关。生物信息学分析表明,16 bp InDel 对山羊生长性状的显著影响可能是由于它与转录因子 AP-2α 和 Sp1 的特异性结合。这些研究结果表明,该基因变异在山羊的生长发育过程中起着至关重要的作用,使其成为筛选具有优良生长性状的山羊的重要 DNA 标记。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Gene
Gene 生物-遗传学
CiteScore
6.10
自引率
2.90%
发文量
718
审稿时长
42 days
期刊介绍: Gene publishes papers that focus on the regulation, expression, function and evolution of genes in all biological contexts, including all prokaryotic and eukaryotic organisms, as well as viruses.
期刊最新文献
Next-generation sequencing as an applicable method: from technical basis to use in medical diagnosis. Genetic diversity and genome-wide association mapping for salt stress tolerance in diverse parental lines of hybrid rice. Editorial Board Computational epitope discovery and in silico design of a bispecific antibody model (COMED hook) to block Plasmodium invasion into erythrocytes No evidence for the LRRK2 p.L1795F variant in a Southern Italian cohort with Parkinson’s disease
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1