Targeting mitochondrial dynamics: an in-silico approach for repurposing antifungal drugs in OSCC treatment.

IF 2.7 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Journal of Biomolecular Structure & Dynamics Pub Date : 2024-11-12 DOI:10.1080/07391102.2024.2425831
Rohith Raali, Neha Sivakumar, Harsh Vardhan J, Suresh P K
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Abstract

Drug repurposing for cancer treatment is a valuable strategy to identify existing drugs with known safety profiles that could combat the neoplasm, by reducing costs. Oral squamous cell carcinoma, an ulcer-proliferative lesion on the mucosal epithelium, is the most common oral malignancy. About 10% of cancer patients within the Indian subcontinent suffer from OSCC, primarily due to chewing of betel plant derivatives. Concomitant administration of the chemotherapeutic agent (Cisplatin/Paclitaxel) is the treatment of choice. Analysis of the oral mycobiome of OSCC patients has projected the role of Candida albicans in potentiating OSCC. Hence, repurposing antifungal drugs emerges as a promising approach, as these drugs could target both the cancer cells and the infection. Cancer cells often have heightened energy requirements, and targeting mitochondrial proteins to disrupt mitochondrial division and induce dysfunction contributing to cell death, offers a method for treating OSCC. We identified 18 mitochondrial targets playing a crucial role in the maintenance of mitochondrial homeostasis. They were docked against 125 antifungal ligand molecules sourced from PUBCHEM. Ligand profiling was performed using Lipinski's rule of 5, SwissADME and ProTox. Also, molecular dynamics and MM-PBSA were performed to validate our results. Among all protein ligand interactions, we observed that targeting DRP1 with itraconazole yielded superior binding and stability. Overall, lower toxicity and thumping ADME properties solidified the choice of ligand. We hope this experimental approach will enable us to provide a basis for selecting a lead molecule for a possible novel nano-formulation and validate our finding through in-vitro cell line-based testing.

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以线粒体动力学为靶点:一种在OSCC治疗中重新使用抗真菌药物的分子内方法。
将药物重新用于癌症治疗是一种有价值的策略,它可以通过降低成本,找到具有已知安全性的现有药物,以抗击肿瘤。口腔鳞状细胞癌是粘膜上皮的一种溃疡增生性病变,是最常见的口腔恶性肿瘤。在印度次大陆,约有 10% 的癌症患者患有口腔鳞状细胞癌,这主要是由于咀嚼槟榔植物衍生物所致。同时服用化疗药物(顺铂/紫杉醇)是首选的治疗方法。对 OSCC 患者口腔真菌生物群的分析显示,白色念珠菌对 OSCC 起着潜在的作用。因此,重新使用抗真菌药物是一种很有前景的方法,因为这些药物可以同时针对癌细胞和感染。癌细胞通常需要更多的能量,而靶向线粒体蛋白可破坏线粒体分裂并诱发导致细胞死亡的功能障碍,这为治疗 OSCC 提供了一种方法。我们发现了 18 个在维持线粒体平衡中发挥关键作用的线粒体靶点。这些靶标与来自 PUBCHEM 的 125 个抗真菌配体分子进行了对接。使用 Lipinski's rule of 5、SwissADME 和 ProTox 进行了配体分析。此外,还进行了分子动力学和 MM-PBSA 验证我们的结果。在所有蛋白质配体相互作用中,我们观察到以伊曲康唑为靶标的 DRP1 具有更强的结合力和稳定性。总之,较低的毒性和令人兴奋的 ADME 特性巩固了配体的选择。我们希望这种实验方法能为我们选择可能的新型纳米制剂的先导分子提供依据,并通过体外细胞系测试验证我们的发现。
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来源期刊
Journal of Biomolecular Structure & Dynamics
Journal of Biomolecular Structure & Dynamics 生物-生化与分子生物学
CiteScore
8.90
自引率
9.10%
发文量
597
审稿时长
2 months
期刊介绍: The Journal of Biomolecular Structure and Dynamics welcomes manuscripts on biological structure, dynamics, interactions and expression. The Journal is one of the leading publications in high end computational science, atomic structural biology, bioinformatics, virtual drug design, genomics and biological networks.
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