Complete chloroplast genome and phylogenetic analysis of Lonicera microphylla Willd. ex Roem. & Schult. 1819 Caprifoliaceae.

IF 0.5 4区生物学 Q4 GENETICS & HEREDITY Mitochondrial DNA. Part B, Resources Pub Date : 2024-11-12 eCollection Date: 2024-01-01 DOI:10.1080/23802359.2024.2427103

Xiaomei Wei, Ying Hu, Baoyou Huang, Yude Peng, Yanxia Zhu, Fan Wei

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Abstract

Lonicera microphylla Willd. ex Roem. & Schult. 1819 is a medicinal plant species, especially for treating chronic fever and dysentery. This study aimed to characterize the chloroplast genome of L. microphylla and reconstruct the phylogenetic relationships among Lonicera Linn. 1753. The circular complete chloroplast genome is 154,945 bp in length, with two inverted repeat regions (IRs; 23,841 bp), separated by a small single-copy region (SSC; 18,789 bp) and a large single-copy region (LSC; 88,474 bp). The overall GC content of L. microphylla plastome was 38.36%. The chloroplast genome encoded a total of 131 genes, including 84 protein-coding genes, 39 tRNA genes, and eight rRNA genes. Phylogenetic analysis reveals that L. microphylla was more closely related to Lonicera tangutica Maxim. 1878. Our result can provide reference for the phylogenetic relationship, resource development, and utilization of Lonicera.

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Lonicera microphylla Willd.1819 Caprifoliaceae.

Lonicera microphylla Willd.1819）是一种药用植物，尤其适用于治疗慢性发热和痢疾。本研究旨在描述 L. microphylla 的叶绿体基因组特征，并重建 Lonicera Linn.1753.环状完整叶绿体基因组全长 154,945 bp，有两个反向重复区（IRs；23,841 bp），被一个小的单拷贝区（SSC；18,789 bp）和一个大的单拷贝区（LSC；88,474 bp）隔开。L. microphylla质体的总 GC 含量为 38.36%。叶绿体基因组共编码 131 个基因，包括 84 个蛋白质编码基因、39 个 tRNA 基因和 8 个 rRNA 基因。系统进化分析表明，L. microphylla 与 Lonicera tangutica Maxim.1878.我们的研究结果可为忍冬的系统发育关系、资源开发和利用提供参考。

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来源期刊

Mitochondrial DNA. Part B, Resources Biochemistry, Genetics and Molecular Biology-Molecular Biology

CiteScore

1.30

自引率

20.00%

发文量

670

期刊介绍： This open access journal publishes high-quality and concise research articles reporting the sequence of full mitochondrial genomes, and short communications focusing on the physical, chemical, and biochemical aspects of mtDNA and proteins involved in mtDNA metabolism and interactions.