Inhibitory Potency of Chlorogenic Acid from Apple Cider Vinegar Against Alzheimer's Disease: Molecular Docking and Dynamics Validation.

IF 6.8 4区 医学 Q1 NUTRITION & DIETETICS Journal of the American Nutrition Association Pub Date : 2024-11-12 DOI:10.1080/27697061.2024.2426558
Smriti Tripathi, Sheikh Murtuja, Mohd Usman Siddique, Azim Ansari, Gourav Rakshit
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Abstract

Objective: The primary cause of memory loss is Alzheimer's disease (AD). Recent studies have shown that natural compounds like apple cider vinegar (ACV) have anti-Alzheimer's capabilities. Essential components of ACV, such as gallic acid and chlorogenic acid, may be in charge of the drug's pharmacological effects.

Methods: Using molecular docking and dynamics (MD), the current work looks at the aspect of ACV that protects against AD. To study the conformational relationships and interaction mechanisms between two biological molecules (such as interactions between proteins and drugs or between proteins), MD simulation is frequently used. MD can help understand molecular structural differences between proteins and small compounds. We used acetylcholinesterase (AChE, PDB ID: 1UT6) to MD chlorogenic and gallic acids, as well as the currently prescribed medication rivastigmine (Standard medication). Furthermore, we determine the binding affinity, which may be responsible for AChE inhibition. MD simulations were performed on docked complexes of chlorogenic acid, gallic acid, and rivastigmine with receptor 1UT6 for a 300 ns trajectory to ensure the stability of docked ligand-protein complexes.

Results: The results showed that chlorogenic acid has the highest binding affinity and stability for AChE inhibition. In the docking and dynamics analysis, both techniques have predicted chlorogenic acid to be a potential constituent of ACV which shows a similar activity when compared to rivastigmine by virtue of binding affinity.

Conclusion: These findings identify chlorogenic acid as the key component of ACV that protects against AD-related cognitive and behavioral impairments. This finding will be critical in the development of ACV-based drugs for Alzheimer's disease treatment.

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苹果醋中的绿原酸对阿尔茨海默病的抑制效力:分子对接和动力学验证。
目的:记忆力减退的主要原因是阿尔茨海默病(AD)。最近的研究表明,苹果醋(ACV)等天然化合物具有抗老年痴呆症的作用。苹果醋中的重要成分,如没食子酸和绿原酸,可能是药物药理作用的主要成分:方法:目前的研究工作采用分子对接和动力学(MD)方法,研究 ACV 抗老年痴呆的作用。为了研究两种生物分子之间的构象关系和相互作用机制(如蛋白质与药物之间或蛋白质之间的相互作用),经常使用 MD 模拟。MD 可以帮助理解蛋白质和小化合物之间的分子结构差异。我们使用乙酰胆碱酯酶(AChE,PDB ID:1UT6)与绿原酸和没食子酸以及目前的处方药利伐斯的明(标准药物)进行 MD 模拟。此外,我们还确定了可能导致 AChE 抑制作用的结合亲和力。我们对绿原酸、没食子酸和利巴斯的明与受体 1UT6 的对接复合物进行了 300 ns 轨迹的 MD 模拟,以确保对接配体-蛋白质复合物的稳定性:结果表明,绿原酸对 AChE 的抑制作用具有最高的结合亲和力和稳定性。在对接和动力学分析中,这两项技术都预测绿原酸是 ACV 的潜在成分,与利巴斯的明相比,绿原酸的结合亲和力显示出相似的活性:这些发现确定了绿原酸是 ACV 的关键成分,它能防止与注意力缺失症有关的认知和行为障碍。这一发现对于开发以 ACV 为基础的阿尔茨海默病治疗药物至关重要。
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