Redistribution of PU.1 partner transcription factor RUNX1 binding secures cell survival during leukemogenesis.

IF 9.4 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY EMBO Journal Pub Date : 2024-11-14 DOI:10.1038/s44318-024-00295-y
Alexander Bender, Füsun Boydere, Ashok Kumar Jayavelu, Alessia Tibello, Thorsten König, Hanna Aleth, Gerd Meyer Zu Hörste, Thomas Vogl, Frank Rosenbauer
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Abstract

Transcription factors (TFs) orchestrating lineage-development often control genes required for cellular survival. However, it is not well understood how cells survive when such TFs are lost, for example in cancer. PU.1 is an essential TF for myeloid fate, and mice with downregulated PU.1 levels develop acute myeloid leukemia (AML). Combining a multi-omics approach with a functional genetic screen, we reveal that PU.1-downregulated cells fundamentally change their survival control from cytokine-driven pathways to overexpression of an autophagy-predominated stem cell gene program, for which we also find evidence in human AML. Control of this program involves redirected chromatin occupancy of the PU.1 partner TF Runx1 to a lineage-inappropriate binding site repertoire. Hence, genomic reallocation of TF binding upon loss of a partner TF can act as a pro-oncogenic failsafe mechanism by sustaining cell survival during leukemogenesis.

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PU.1伙伴转录因子RUNX1结合的再分布确保了白血病发生过程中细胞的存活。
协调细胞系发育的转录因子(TFs)通常控制着细胞存活所需的基因。然而,人们并不十分清楚当这些转录因子丢失时,例如在癌症中,细胞是如何存活下来的。PU.1是决定髓系命运的重要TF,PU.1水平下调的小鼠会罹患急性髓系白血病(AML)。我们将多组学方法与功能基因筛选相结合,发现PU.1下调的细胞从根本上改变了它们的生存控制,从细胞因子驱动的途径转变为自噬为主的干细胞基因程序的过度表达,我们在人类急性髓细胞白血病中也发现了这一证据。对这一程序的控制涉及PU.1伙伴TF Runx1的染色质占位重定向到一个与品系不相称的结合位点。因此,在白血病发生过程中,失去伴侣 TF 后,TF 结合的基因组重新分配可通过维持细胞存活而成为一种有利于致癌的故障安全机制。
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来源期刊
EMBO Journal
EMBO Journal 生物-生化与分子生物学
CiteScore
18.90
自引率
0.90%
发文量
246
审稿时长
1.5 months
期刊介绍: The EMBO Journal has stood as EMBO's flagship publication since its inception in 1982. Renowned for its international reputation in quality and originality, the journal spans all facets of molecular biology. It serves as a platform for papers elucidating original research of broad general interest in molecular and cell biology, with a distinct focus on molecular mechanisms and physiological relevance. With a commitment to promoting articles reporting novel findings of broad biological significance, The EMBO Journal stands as a key contributor to advancing the field of molecular biology.
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