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Histamine synthesis and transport are coupled in axon terminals via a dual quality control system. 组胺的合成和运输在轴突末端通过双重质量控制系统耦合在一起。
IF 9.4 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-09-06 DOI: 10.1038/s44318-024-00223-0
Lei Peng, Tao Wang

Monoamine neurotransmitters generated by de novo synthesis are rapidly transported and stored into synaptic vesicles at axon terminals. This transport is essential both for sustaining synaptic transmission and for limiting the toxic effects of monoamines. Here, synthesis of the monoamine histamine by histidine decarboxylase (HDC) and subsequent loading of histamine into synaptic vesicles are shown to be physically and functionally coupled within Drosophila photoreceptor terminals. This process requires HDC anchoring to synaptic vesicles via interactions with N-ethylmaleimide-sensitive fusion protein 1 (NSF1). Disassociating HDC from synaptic vesicles disrupts visual synaptic transmission and causes somatic accumulation of histamine, which leads to retinal degeneration. We further identified a proteasome degradation system mediated by the E3 ubiquitin ligase, purity of essence (POE), which clears mislocalized HDC from the soma, thus eliminating the cytotoxic effects of histamine. Taken together, our results reveal a dual mechanism for translocation and degradation of HDC that ensures restriction of histamine synthesis to axonal terminals and at the same time rapid loading into synaptic vesicles. This is crucial for sustaining neurotransmission and protecting against cytotoxic monoamines.

通过新合成产生的单胺类神经递质会被迅速转运并储存到轴突末端的突触小泡中。这种转运对于维持突触传递和限制单胺类神经递质的毒性作用至关重要。在这里,组氨酸脱羧酶(HDC)合成单胺组胺以及随后将组胺装入突触小泡的过程被证明在果蝇感光器末端是物理和功能耦合的。这一过程需要 HDC 通过与 N-乙基马来酰亚胺敏感融合蛋白 1(NSF1)的相互作用锚定在突触小泡上。将 HDC 从突触小泡中分离出来会破坏视觉突触传递,并导致组胺在体表蓄积,从而导致视网膜变性。我们进一步发现了一个由 E3 泛素连接酶纯度(POE)介导的蛋白酶体降解系统,它能清除体细胞中错误定位的 HDC,从而消除组胺的细胞毒性作用。综上所述,我们的研究结果揭示了组胺转运和降解的双重机制,它既能确保组胺的合成限制在轴突末端,又能确保组胺快速进入突触小泡。这对于维持神经传递和抵御细胞毒性单胺类物质至关重要。
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引用次数: 0
Author Correction: Limited oxygen in standard cell culture alters metabolism and function of differentiated cells. 作者更正:标准细胞培养中的有限氧气会改变分化细胞的新陈代谢和功能。
IF 9.4 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-09-06 DOI: 10.1038/s44318-024-00230-1
Joycelyn Tan, Sam Virtue, Dougall M Norris, Olivia J Conway, Ming Yang, Guillaume Bidault, Christopher Gribben, Fatima Lugtu, Ioannis Kamzolas, James R Krycer, Richard J Mills, Lu Liang, Conceição Pereira, Martin Dale, Amber S Shun-Shion, Harry Jm Baird, James A Horscroft, Alice P Sowton, Marcella Ma, Stefania Carobbio, Evangelia Petsalaki, Andrew J Murray, David C Gershlick, James A Nathan, James E Hudson, Ludovic Vallier, Kelsey H Fisher-Wellman, Christian Frezza, Antonio Vidal-Puig, Daniel J Fazakerley
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引用次数: 0
Structure of tetrameric forms of the serotonin-gated 5-HT3A receptor ion channel. 羟色胺门控 5-HT3A 受体离子通道的四聚体结构。
IF 9.4 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-09-04 DOI: 10.1038/s44318-024-00191-5
Bianca Introini, Wenqiang Cui, Xiaofeng Chu, Yingyi Zhang, Ana Catarina Alves, Luise Eckhardt-Strelau, Sabrina Golusik, Menno Tol, Horst Vogel, Shuguang Yuan, Mikhail Kudryashev

Multimeric membrane proteins are produced in the endoplasmic reticulum and transported to their target membranes which, for ion channels, is typically the plasma membrane. Despite the availability of many fully assembled channel structures, our understanding of assembly intermediates, multimer assembly mechanisms, and potential functions of non-standard assemblies is limited. We demonstrate that the pentameric ligand-gated serotonin 5-HT3A receptor (5-HT3AR) can assemble to tetrameric forms and report the structures of the tetramers in plasma membranes of cell-derived microvesicles and in membrane memetics using cryo-electron microscopy and tomography. The tetrameric structures have near-symmetric transmembrane domains, and asymmetric extracellular domains, and can bind serotonin molecules. Computer simulations, based on our cryo-EM structures, were used to decipher the assembly pathway of pentameric 5-HT3R and suggest a potential functional role for the tetrameric receptors.

多聚膜蛋白在内质网中产生,并被运输到其目标膜上,对于离子通道来说,目标膜通常是质膜。尽管有许多完全组装的通道结构,但我们对组装中间体、多聚体组装机制以及非标准组装的潜在功能的了解还很有限。我们证明了五聚体配体门控血清素 5-HT3A 受体(5-HT3AR)可以组装成四聚体形式,并利用冷冻电镜和断层扫描技术报告了细胞衍生微囊质膜和膜记忆体中的四聚体结构。四聚体结构具有近乎对称的跨膜结构域和不对称的胞外结构域,并能与血清素分子结合。根据我们的冷冻电镜结构进行的计算机模拟破解了五聚体 5-HT3R 的组装途径,并提出了四聚体受体的潜在功能作用。
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引用次数: 0
Disordered regions in the IRE1α ER lumenal domain mediate its stress-induced clustering. IRE1α ER内腔结构域中的紊乱区域介导了其应激诱导的聚类。
IF 9.4 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-09-04 DOI: 10.1038/s44318-024-00207-0
Paulina Kettel, Laura Marosits, Elena Spinetti, Michael Rechberger, Caterina Giannini, Philipp Radler, Isabell Niedermoser, Irmgard Fischer, Gijs A Versteeg, Martin Loose, Roberto Covino, G Elif Karagöz

Conserved signaling cascades monitor protein-folding homeostasis to ensure proper cellular function. One of the evolutionary conserved key players is IRE1, which maintains endoplasmic reticulum (ER) homeostasis through the unfolded protein response (UPR). Upon accumulation of misfolded proteins in the ER, IRE1 forms clusters on the ER membrane to initiate UPR signaling. What regulates IRE1 cluster formation is not fully understood. Here, we show that the ER lumenal domain (LD) of human IRE1α forms biomolecular condensates in vitro. IRE1α LD condensates were stabilized both by binding to unfolded polypeptides as well as by tethering to model membranes, suggesting their role in assembling IRE1α into signaling-competent stable clusters. Molecular dynamics simulations indicated that weak multivalent interactions drive IRE1α LD clustering. Mutagenesis experiments identified disordered regions in IRE1α LD to control its clustering in vitro and in cells. Importantly, dysregulated clustering of IRE1α mutants led to defects in IRE1α signaling. Our results revealed that disordered regions in IRE1α LD control its clustering and suggest their role as a common strategy in regulating protein assembly on membranes.

保守的信号级联可监控蛋白质折叠的平衡,以确保细胞的正常功能。IRE1是进化保守的关键参与者之一,它通过未折叠蛋白反应(UPR)维持内质网(ER)的平衡。当折叠错误的蛋白质在 ER 中积累时,IRE1 会在 ER 膜上形成簇,启动 UPR 信号。目前还不完全清楚是什么在调控 IRE1 簇的形成。在这里,我们发现人类 IRE1α 的 ER 腔域(LD)在体外形成了生物分子凝聚体。IRE1α LD凝聚物通过与未折叠的多肽结合以及与模型膜的系链而稳定,这表明它们在将IRE1α组装成具有信号传导能力的稳定团簇中发挥作用。分子动力学模拟表明,微弱的多价相互作用推动了 IRE1α LD 聚类。突变实验确定了IRE1α LD中的无序区域,以控制其在体外和细胞中的聚类。重要的是,IRE1α突变体的聚类失调导致了IRE1α信号传导的缺陷。我们的研究结果表明,IRE1α LD中的无序区域控制着它的聚类,并表明它们是调节蛋白质在膜上组装的一种常见策略。
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引用次数: 0
Elucidating the assembly of gas vesicles by systematic protein-protein interaction analysis. 通过系统的蛋白质-蛋白质相互作用分析,阐明气体囊泡的组装。
IF 9.4 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-09-03 DOI: 10.1038/s44318-024-00178-2
Manuel Iburg, Andrew P Anderson, Vivian T Wong, Erica D Anton, Art He, George J Lu

Gas vesicles (GVs) are gas-filled microbial organelles formed by unique 3-nm thick, amphipathic, force-bearing protein shells, which can withstand multiple atmospheric pressures and maintain a physically stable air bubble with megapascal surface tension. However, the molecular process of GV assembly remains elusive. To begin understanding this process, we have devised a high-throughput in vivo assay to determine the interactions of all 11 proteins in the pNL29 GV operon. Complete or partial deletions of the operon establish interdependent relationships among GV proteins during assembly. We also examine the tolerance of the GV assembly process to protein mutations and the cellular burdens caused by GV proteins. Clusters of GV protein interactions are revealed, proposing plausible protein complexes that are important for GV assembly. We anticipate our findings will set the stage for designing GVs that efficiently assemble in heterologous hosts during biomedical applications.

气泡(GVs)是一种充满气体的微生物细胞器,由独特的 3 纳米厚的两亲性受力蛋白外壳形成,可以承受多种大气压力,并以兆帕斯卡的表面张力维持一个物理稳定的气泡。然而,气泡组装的分子过程仍然难以捉摸。为了开始了解这一过程,我们设计了一种高通量体内试验,以确定 pNL29 GV 操作子中所有 11 个蛋白质的相互作用。操作子的完全或部分缺失确定了 GV 蛋白在组装过程中的相互依存关系。我们还研究了 GV 组装过程对蛋白质突变的耐受性以及 GV 蛋白造成的细胞负担。我们揭示了 GV 蛋白相互作用的群集,提出了对 GV 组装非常重要的可信蛋白复合物。我们预计,我们的发现将为在生物医学应用中设计能在异源宿主中高效组装的 GV 搭建舞台。
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引用次数: 0
Author Correction: BCL7A-containing SWI/SNF/BAF complexes modulate mitochondrial bioenergetics during neural progenitor differentiation. 作者更正:含 BCL7A 的 SWI/SNF/BAF 复合物在神经祖细胞分化过程中调节线粒体生物能。
IF 9.4 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-09-02 DOI: 10.1038/s44318-024-00157-7
Lena Wischhof, Hang-Mao Lee, Janine Tutas, Clemens Overkott, Eileen Tedt, Miriam Stork, Michael Peitz, Oliver Brüstle, Thomas Ulas, Kristian Händler, Joachim L Schultze, Dan Ehninger, Pierluigi Nicotera, Paolo Salomoni, Daniele Bano
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引用次数: 0
Structural insights into the molecular effects of the anthelmintics monepantel and betaine on the Caenorhabditis elegans acetylcholine receptor ACR-23. 抗蠕虫药莫奈潘特尔和甜菜碱对优雅尾线虫乙酰胆碱受体 ACR-23 分子影响的结构性启示。
IF 9.4 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-09-01 Epub Date: 2024-07-15 DOI: 10.1038/s44318-024-00165-7
Fenglian Liu, Tianyu Li, Huihui Gong, Fei Tian, Yan Bai, Haowei Wang, Chonglin Yang, Yang Li, Fei Guo, Sheng Liu, Qingfeng Chen

Anthelmintics are drugs used for controlling pathogenic helminths in animals and plants. The natural compound betaine and the recently developed synthetic compound monepantel are both anthelmintics that target the acetylcholine receptor ACR-23 and its homologs in nematodes. Here, we present cryo-electron microscopy structures of ACR-23 in apo, betaine-bound, and betaine- and monepantel-bound states. We show that ACR-23 forms a homo-pentameric channel, similar to some other pentameric ligand-gated ion channels (pLGICs). While betaine molecules are bound to the classical neurotransmitter sites in the inter-subunit interfaces in the extracellular domain, monepantel molecules are bound to allosteric sites formed in the inter-subunit interfaces in the transmembrane domain of the receptor. Although the pore remains closed in betaine-bound state, monepantel binding results in an open channel by wedging into the cleft between the transmembrane domains of two neighboring subunits, which causes dilation of the ion conduction pore. By combining structural analyses with site-directed mutagenesis, electrophysiology and in vivo locomotion assays, we provide insights into the mechanism of action of the anthelmintics monepantel and betaine.

抗蠕虫药是用于控制动物和植物中致病蠕虫的药物。天然化合物甜菜碱和最近开发的合成化合物莫奈潘特尔都是针对线虫体内乙酰胆碱受体 ACR-23 及其同源物的抗蠕虫药。在这里,我们展示了ACR-23在apo、与甜菜碱结合以及与甜菜碱和莫奈潘特尔结合状态下的冷冻电镜结构。我们发现,ACR-23 形成了一个同源五聚体通道,类似于其他一些五聚体配体门控离子通道(pLGIC)。甜菜碱分子与细胞外结构域亚基间界面上的经典神经递质位点结合,而莫奈潘特尔分子则与受体跨膜结构域亚基间界面上形成的异构位点结合。虽然在甜菜碱结合状态下孔道仍处于关闭状态,但莫奈潘特尔结合后会楔入两个相邻亚基的跨膜结构域之间的裂隙,从而导致离子传导孔道扩张,从而形成开放通道。通过将结构分析与定点突变、电生理学和体内运动试验相结合,我们深入了解了杀虫药莫奈潘特尔和甜菜碱的作用机制。
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引用次数: 0
Reactive oxygen species activate the Drosophila TNF receptor Wengen for damage-induced regeneration. 活性氧激活果蝇 TNF 受体 Wengen,促进损伤诱导的再生。
IF 9.4 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-09-01 Epub Date: 2024-07-17 DOI: 10.1038/s44318-024-00155-9
José Esteban-Collado, Mar Fernández-Mañas, Manuel Fernández-Moreno, Ignacio Maeso, Montserrat Corominas, Florenci Serras

Tumor necrosis factor receptors (TNFRs) control pleiotropic pro-inflammatory functions that range from apoptosis to cell survival. The ability to trigger a particular function will depend on the upstream cues, association with regulatory complexes, and downstream pathways. In Drosophila melanogaster, two TNFRs have been identified, Wengen (Wgn) and Grindelwald (Grnd). Although several reports associate these receptors with JNK-dependent apoptosis, it has recently been found that Wgn activates a variety of other functions. We demonstrate that Wgn is required for survival by protecting cells from apoptosis. This is mediated by dTRAF1 and results in the activation of p38 MAP kinase. Remarkably, Wgn is required for apoptosis-induced regeneration and is activated by the reactive oxygen species (ROS) produced following apoptosis. This ROS activation is exclusive for Wgn, but not for Grnd, and can occur after knocking down Eiger/TNFα. The extracellular cysteine-rich domain of Grnd is much more divergent than that of Wgn, which is more similar to TNFRs from other animals, including humans. Our results show a novel TNFR function that responds to stressors by ensuring p38-dependent regeneration.

肿瘤坏死因子受体(TNFR)控制着从细胞凋亡到细胞存活的多种促炎功能。触发特定功能的能力取决于上游线索、与调控复合物的关联以及下游途径。在黑腹果蝇中,发现了两种 TNFR 受体,即 Wengen(Wgn)和 Grindelwald(Grnd)。尽管一些报道称这些受体与依赖于 JNK 的细胞凋亡有关,但最近发现 Wgn 还能激活多种其他功能。我们证明,Wgn 是保护细胞免于凋亡的生存所必需的。这是由 dTRAF1 介导的,并导致 p38 MAP 激酶的激活。值得注意的是,Wgn 是细胞凋亡诱导再生所必需的,并被细胞凋亡后产生的活性氧(ROS)激活。这种 ROS 激活对 Wgn 而言是唯一的,但对 Grnd 则不是,而且在敲除 Eiger/TNFα 后也会发生。与Wgn相比,Grnd的富半胱氨酸胞外结构域差异更大,而Wgn与其他动物(包括人类)的TNFR更相似。我们的研究结果表明了一种新的TNFR功能,它通过确保p38依赖性再生来应对压力。
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引用次数: 0
Wengen's hidden powers: ROS triggers a TNFR-dependent tissue regenerative pathway in Drosophila. 翁根的隐藏力量:ROS 触发果蝇体内依赖 TNFR 的组织再生途径
IF 9.4 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-09-01 Epub Date: 2024-07-17 DOI: 10.1038/s44318-024-00170-w
Ditte S Andersen, Julien Colombani
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引用次数: 0
A viral effector blocks the turnover of a plant NLR receptor to trigger a robust immune response. 一种病毒效应物阻断了植物 NLR 受体的转换,从而引发强大的免疫反应。
IF 9.4 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-09-01 Epub Date: 2024-07-17 DOI: 10.1038/s44318-024-00174-6
Chunli Wang, Min Zhu, Hao Hong, Jia Li, Chongkun Zuo, Yu Zhang, Yajie Shi, Suyu Liu, Haohua Yu, Yuling Yan, Jing Chen, Lingna Shangguan, Aiping Zhi, Rongzhen Chen, Karen Thulasi Devendrakumar, Xiaorong Tao

Plant intracellular nucleotide-binding and leucine-rich repeat immune receptors (NLRs) play a key role in activating a strong pathogen defense response. Plant NLR proteins are tightly regulated and accumulate at very low levels in the absence of pathogen effectors. However, little is known about how this low level of NLR proteins is able to induce robust immune responses upon recognition of pathogen effectors. Here, we report that, in the absence of effector, the inactive form of the tomato NLR Sw-5b is targeted for ubiquitination by the E3 ligase SBP1. Interaction of SBP1 with Sw-5b via only its N-terminal domain leads to slow turnover. In contrast, in its auto-active state, Sw-5b is rapidly turned over as SBP1 is upregulated and interacts with both its N-terminal and NB-LRR domains. During infection with the tomato spotted wilt virus, the viral effector NSm interacts with Sw-5b and disrupts the interaction of Sw-5b with SBP1, thereby stabilizing the active Sw-5b and allowing it to induce a robust immune response.

植物细胞内核苷酸结合和富亮氨酸重复免疫受体(NLRs)在激活强烈的病原体防御反应中发挥着关键作用。植物 NLR 蛋白受到严格调控,在没有病原体效应物的情况下以极低水平积累。然而,人们对这种低水平的 NLR 蛋白如何在识别病原体效应物时诱导强有力的免疫反应知之甚少。在这里,我们报告了在没有效应物的情况下,番茄 NLR Sw-5b 的非活性形式被 E3 连接酶 SBP1 靶向泛素化。SBP1 仅通过其 N 端结构域与 Sw-5b 相互作用,导致其周转缓慢。与此相反,在自动激活状态下,Sw-5b 会随着 SBP1 的上调并与其 N 端和 NB-LRR 结构域相互作用而迅速转换。在番茄斑萎病毒感染过程中,病毒效应物 NSm 与 Sw-5b 相互作用,破坏 Sw-5b 与 SBP1 的相互作用,从而稳定活性 Sw-5b,使其能够诱导强有力的免疫反应。
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引用次数: 0
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