Prediction of SARS-CoV-2 infection cases based on the meta-SEIRS model.

IF 2.5 4区 医学 Q3 INFECTIOUS DISEASES Epidemiology and Infection Pub Date : 2024-11-18 DOI:10.1017/S0950268824001274
Wenhui Zhu, Xuefeng Tang, Ying Chen, Miaoshuang Chen, Xinyue Han, Yuhuan Xie, Qiang Lv, Rongjie Wei, Dingzi Zhou, Changhong Yang, Tao Zhang
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Abstract

Predicting epidemic trends of coronavirus disease 2019 (COVID-19) remains a key public health concern globally today. However, the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) reinfection rate in previous studies of the transmission dynamics model was mostly a fixed value. Therefore, we proposed a meta-Susceptible-Exposed-Infectious-Recovered-Susceptible (SEIRS) model by adding a time-varying SARS-CoV-2 reinfection rate to the transmission dynamics model to more accurately characterize the changes in the number of infected persons. The time-varying reinfection rate was estimated using random-effect multivariate meta-regression based on published literature reports of SARS-CoV-2 reinfection rates. The meta-SEIRS model was constructed to predict the epidemic trend of COVID-19 from February to December 2023 in Sichuan province. Finally, according to the online questionnaire survey, the SARS-CoV-2 infection rate at the end of December 2022 in Sichuan province was 82.45%. The time-varying effective reproduction number in Sichuan province had two peaks from July to December 2022, with a maximum peak value of about 15. The prediction results based on the meta-SEIRS model showed that the highest peak of the second wave of COVID-19 in Sichuan province would be in late May 2023. The number of new infections per day at the peak would be up to 2.6 million. We constructed a meta-SEIRS model to predict the epidemic trend of COVID-19 in Sichuan province, which was consistent with the trend of SARS-CoV-2 positivity in China. Therefore, a meta-SEIRS model parameterized based on evidence-based data can be more relevant to the actual situation and thus more accurately predict future trends in the number of infections.

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基于 Meta-SEIRS 模型的 SARS-CoV-2 感染病例预测。
预测 2019 年冠状病毒疾病(COVID-19)的流行趋势仍然是当今全球关注的一个重要公共卫生问题。然而,在以往的传播动力学模型研究中,严重急性呼吸系统综合征冠状病毒2(SARS-CoV-2)的再感染率大多是一个固定值。因此,我们提出了一种元易感-暴露-感染-恢复-易感(SEIRS)模型,在传播动力学模型中加入了随时间变化的 SARS-CoV-2 再感染率,以更准确地描述感染人数的变化。时变再感染率是根据已发表的有关 SARS-CoV-2 再感染率的文献报告,采用随机效应多元元回归法估算得出的。通过建立元-SEIRS模型,预测了2023年2月至12月COVID-19在四川省的流行趋势。最后,根据在线问卷调查,2022 年 12 月底四川省 SARS-CoV-2 感染率为 82.45%。四川省的有效繁殖数在 2022 年 7 月至 12 月期间出现了两个高峰,最高峰值约为 15。基于 meta-SEIRS 模型的预测结果显示,四川省 COVID-19 第二波的最高峰将出现在 2023 年 5 月下旬。高峰期每天新增感染人数将达到 260 万。我们构建了一个 meta-SEIRS 模型来预测 COVID-19 在四川省的流行趋势,该模型与中国的 SARS-CoV-2 阳性趋势一致。因此,基于循证数据进行参数化的元-SEIRS 模型可以更贴近实际情况,从而更准确地预测未来感染人数的趋势。
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来源期刊
Epidemiology and Infection
Epidemiology and Infection 医学-传染病学
CiteScore
4.10
自引率
2.40%
发文量
366
审稿时长
3-6 weeks
期刊介绍: Epidemiology & Infection publishes original reports and reviews on all aspects of infection in humans and animals. Particular emphasis is given to the epidemiology, prevention and control of infectious diseases. The scope covers the zoonoses, outbreaks, food hygiene, vaccine studies, statistics and the clinical, social and public-health aspects of infectious disease, as well as some tropical infections. It has become the key international periodical in which to find the latest reports on recently discovered infections and new technology. For those concerned with policy and planning for the control of infections, the papers on mathematical modelling of epidemics caused by historical, current and emergent infections are of particular value.
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