Activation of Cryptic Secondary Metabolite Biosynthesis in Tobacco BY-2 Suspension Cells by Epigenetic Modifiers.

IF 3.1 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Applied Biochemistry and Biotechnology Pub Date : 2024-11-19 DOI:10.1007/s12010-024-05096-x
Taiji Nomura, Yasuo Kato
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Abstract

Cultured plant cells often biosynthesize secondary metabolites to a lesser extent relative to the mother plants. This phenomenon is associated with epigenetic alterations of the biosynthetic gene(s). Here we investigated the effectiveness of epigenetic modifiers, such as inhibitors of histone deacetylase (HDAC) and DNA methyltransferase (DNMT), to activate cryptic secondary metabolite biosynthesis in tobacco (Nicotiana tabacum) BY-2 cells. The BY-2 suspension cells cultured with an HDAC inhibitor, suberoyl bis-hydroxamic acid, exhibited strong biosynthesis of four compounds that were originally present at trace concentrations. The induced compounds were identified as caffeoylputrescine (1), 4-O-β-D-glucopyranosylferulic acid (2), 5-O-caffeoylquinic acid (3), and feruloylputrescine (4). Biosynthetic activation of compounds 1-4 was reproduced by two other HDAC inhibitors. Treatment of the cells with a DNMT inhibitor (zebularine) also activated the biosynthesis of compounds 1-4, but had a limited effectiveness relative to the HDAC inhibitors, indicating that histone acetylation levels are involved more than DNA methylation levels in the epigenetic regulation of the biosynthesis of compounds 1-4 in the BY-2 cells. Following our previous demonstration using cultured cells of a monocotyledonous plant, this study demonstrates the utility of epigenetic modifiers to activate cryptic secondary metabolite biosynthesis in cultured cells of a dicotyledonous plant.

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表观遗传修饰剂激活烟草 BY-2 悬浮细胞中隐性次生代谢物的合成
与母株相比,培养植物细胞生物合成次生代谢物的能力往往较弱。这种现象与生物合成基因的表观遗传学改变有关。在此,我们研究了表观遗传修饰剂(如组蛋白去乙酰化酶(HDAC)和 DNA 甲基转移酶(DNMT)抑制剂)激活烟草(Nicotiana tabacum)BY-2 细胞中隐性次生代谢物生物合成的有效性。用 HDAC 抑制剂--亚伯酰双羟肟酸--培养的 BY-2 悬浮细胞显示出四种化合物的强烈生物合成,而这些化合物原本只存在于微量浓度中。经鉴定,这些被诱导的化合物分别是咖啡酰石蒜碱(1)、4-O-β-D-吡喃葡萄糖基阿魏酸(2)、5-O-咖啡酰奎宁酸(3)和阿魏酰石蒜碱(4)。另外两种 HDAC 抑制剂也能再现化合物 1-4 的生物合成活化。用一种 DNMT 抑制剂(zebularine)处理细胞也能激活化合物 1-4 的生物合成,但与 HDAC 抑制剂相比效果有限,这表明组蛋白乙酰化水平比 DNA 甲基化水平更能参与 BY-2 细胞中化合物 1-4 生物合成的表观遗传调控。继我们之前使用单子叶植物培养细胞进行论证之后,本研究证明了表观遗传修饰剂对激活双子叶植物培养细胞中隐性次生代谢物生物合成的作用。
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来源期刊
Applied Biochemistry and Biotechnology
Applied Biochemistry and Biotechnology 工程技术-生化与分子生物学
CiteScore
5.70
自引率
6.70%
发文量
460
审稿时长
5.3 months
期刊介绍: This journal is devoted to publishing the highest quality innovative papers in the fields of biochemistry and biotechnology. The typical focus of the journal is to report applications of novel scientific and technological breakthroughs, as well as technological subjects that are still in the proof-of-concept stage. Applied Biochemistry and Biotechnology provides a forum for case studies and practical concepts of biotechnology, utilization, including controls, statistical data analysis, problem descriptions unique to a particular application, and bioprocess economic analyses. The journal publishes reviews deemed of interest to readers, as well as book reviews, meeting and symposia notices, and news items relating to biotechnology in both the industrial and academic communities. In addition, Applied Biochemistry and Biotechnology often publishes lists of patents and publications of special interest to readers.
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