A collection of split-Gal4 drivers targeting conserved signaling ligands in Drosophila.

IF 2.1 3区 生物学 Q3 GENETICS & HEREDITY G3: Genes|Genomes|Genetics Pub Date : 2024-11-21 DOI:10.1093/g3journal/jkae276
Ben Ewen-Campen, Neha Joshi, Ashley Suraj Hermon, Tanuj Thakkar, Jonathan Zirin, Norbert Perrimon
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Abstract

Communication between cells in metazoan organisms is mediated by a remarkably small number of highly conserved signaling pathways. Given this small number of signaling pathways, the existence of multiple related ligands for many of these pathways represents a key evolutionary innovation for encoding complexity into cell-cell signaling. Relatedly, crosstalk between pathways is another critical feature which allows a modest number pathways to ultimately generate an enormously diverse range of outcomes. It would thus be useful to have genetic tools to identify and manipulate not only those cells which express a given signaling ligand, but also those cells that specifically co-express pairs of signaling ligands. We present a collection of split-Gal4 knock-in lines targeting many of the ligands for highly conserved signaling pathways in Drosophila (Notch, Hedgehog, FGF, EGF, TGFβ, JAK/STAT, JNK, and PVR). We demonstrate that these lines faithfully recapitulate the endogenous expression pattern of their targets, and that they can be used to identify cells and tissues that co-express pairs of ligands. As a proof of principle, we demonstrate that the 4th chromosome TGFβ ligands myoglianin and maverick are broadly co-expressed in muscles and other tissues of both larva and adults, and that the JAK/STAT ligands upd2 and upd3 are partially co-expressed from cells of the midgut following gut damage. Together with our previously collection of split-Gal4 lines targeting the seven Wnt ligands, this resource allows Drosophila researchers to identify and genetically manipulate cells that specifically express pairs of conserved ligands from nearly all the major intercellular signaling pathways.

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针对果蝇保守信号配体的分裂-Gal4驱动程序集。
后生动物细胞之间的通讯是由数量极少的高度保守的信号通路介导的。由于信号通路的数量很少,其中许多通路都存在多种相关配体,这是一种关键的进化创新,可将复杂性编码为细胞-细胞信号。与此相关的是,通路之间的串扰是另一个关键特征,它使得数量不多的通路最终能产生多种多样的结果。因此,如果有基因工具不仅能识别和操纵表达特定信号配体的细胞,还能识别和操纵特异性共同表达成对信号配体的细胞,那将是非常有用的。我们展示了一系列针对果蝇高度保守信号通路配体(Notch、Hedgehog、FGF、EGF、TGFβ、JAK/STAT、JNK 和 PVR)的分裂-Gal4 基因敲入系。我们证明,这些品系忠实地再现了其靶标的内源表达模式,并可用于识别共同表达配体对的细胞和组织。作为原理证明,我们证明了第 4 染色体 TGFβ 配体 myoglianin 和 maverick 在幼虫和成虫的肌肉和其他组织中广泛共表达,而 JAK/STAT 配体 upd2 和 upd3 在肠道损伤后的中肠细胞中部分共表达。这一资源与我们以前收集的针对七种 Wnt 配体的分裂-Gal4 株系一起,使果蝇研究人员能够识别和遗传操作特异性表达几乎所有主要细胞间信号通路中一对保守配体的细胞。
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来源期刊
G3: Genes|Genomes|Genetics
G3: Genes|Genomes|Genetics GENETICS & HEREDITY-
CiteScore
5.10
自引率
3.80%
发文量
305
审稿时长
3-8 weeks
期刊介绍: G3: Genes, Genomes, Genetics provides a forum for the publication of high‐quality foundational research, particularly research that generates useful genetic and genomic information such as genome maps, single gene studies, genome‐wide association and QTL studies, as well as genome reports, mutant screens, and advances in methods and technology. The Editorial Board of G3 believes that rapid dissemination of these data is the necessary foundation for analysis that leads to mechanistic insights. G3, published by the Genetics Society of America, meets the critical and growing need of the genetics community for rapid review and publication of important results in all areas of genetics. G3 offers the opportunity to publish the puzzling finding or to present unpublished results that may not have been submitted for review and publication due to a perceived lack of a potential high-impact finding. G3 has earned the DOAJ Seal, which is a mark of certification for open access journals, awarded by DOAJ to journals that achieve a high level of openness, adhere to Best Practice and high publishing standards.
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