GENERATIVE FORECASTING OF BRAIN ACTIVITY ENHANCES ALZHEIMER'S CLASSIFICATION AND INTERPRETATION.

ArXiv Pub Date : 2024-10-30
Yutong Gao, Vince D Calhoun, Robyn L Miller
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Abstract

Understanding the relationship between cognition and intrinsic brain activity through purely data-driven approaches remains a significant challenge in neuroscience. Resting-state functional magnetic resonance imaging (rs-fMRI) offers a non-invasive method to monitor regional neural activity, providing a rich and complex spatiotemporal data structure. Deep learning has shown promise in capturing these intricate representations. However, the limited availability of large datasets, especially for disease-specific groups such as Alzheimer's Disease (AD), constrains the generalizability of deep learning models. In this study, we focus on multivariate time series forecasting of independent component networks derived from rs-fMRI as a form of data augmentation, using both a conventional LSTM-based model and the novel Transformer-based BrainLM model. We assess their utility in AD classification, demonstrating how generative forecasting enhances classification performance. Post-hoc interpretation of BrainLM reveals class-specific brain network sensitivities associated with AD.

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大脑活动的生成预测增强了阿尔茨海默氏症的分类和解释能力。
通过纯粹的数据驱动方法来理解认知与大脑内在活动之间的关系,仍然是神经科学领域的一项重大挑战。静息态功能磁共振成像(rs-fMRI)提供了一种监测区域神经活动的无创方法,提供了丰富而复杂的时空数据结构。深度学习已显示出捕捉这些复杂表征的前景。然而,大型数据集的可用性有限,尤其是针对阿尔茨海默病(AD)等特定疾病群体的数据集,限制了深度学习模型的普适性。在本研究中,我们使用基于 LSTM 的传统模型和基于 Transformer 的新型 BrainLM 模型,将重点放在对源自 rs-fMRI 的独立分量网络的多变量时间序列预测上,以此作为一种数据增强形式。我们评估了它们在 AD 分类中的实用性,展示了生成预测是如何提高分类性能的。对BrainLM的事后解释揭示了与AD相关的特定类别脑网络敏感性。
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