Exploratory analysis of Type B Aortic Dissection (TBAD) segmentation in 2D CTA images using various kernels.

IF 5.4 2区 医学 Q1 ENGINEERING, BIOMEDICAL Computerized Medical Imaging and Graphics Pub Date : 2024-11-18 DOI:10.1016/j.compmedimag.2024.102460
Ayman Abaid, Srinivas Ilancheran, Talha Iqbal, Niamh Hynes, Ihsan Ullah
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Abstract

Type-B Aortic Dissection is a rare but fatal cardiovascular disease characterized by a tear in the inner layer of the aorta, affecting 3.5 per 100,000 individuals annually. In this work, we explore the feasibility of leveraging two-dimensional Convolutional Neural Network (CNN) models to perform accurate slice-by-slice segmentation of true lumen, false lumen and false lumen thrombus in Computed Tomography Angiography images. The study performed an exploratory analysis of three 2D U-Net models: the baseline 2D U-Net, a variant of U-Net with atrous convolutions, and a U-Net with a custom layer featuring a position-oriented, partially shared weighting scheme kernel. These models were trained and benchmarked against a state-of-the-art baseline 3D U-Net model. Overall, our U-Net with the VGG19 encoder architecture achieved the best performance score among all other models, with a mean Dice score of 80.48% and an IoU score of 72.93%. The segmentation results were also compared with the Segment Anything Model (SAM) and the UniverSeg models. Our findings indicate that our 2D U-Net models excel in false lumen and true lumen segmentation accuracy while achieving lower false lumen thrombus segmentation accuracy compared to the state-of-the-art 3D U-Net model. The study findings highlight the complexities involved in developing segmentation models, especially for cardiovascular medical images, and emphasize the importance of developing lightweight models for real-time decision-making to improve overall patient care.

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使用各种核对二维 CTA 图像中 B 型主动脉夹层(TBAD)分割的探索性分析。
B 型主动脉夹层是一种以主动脉内层撕裂为特征的罕见但致命的心血管疾病,每年每 10 万人中就有 3.5 人患病。在这项研究中,我们探索了利用二维卷积神经网络(CNN)模型对计算机断层扫描血管造影图像中的真腔、假腔和假腔血栓进行逐片精确分割的可行性。该研究对三种二维 U-Net 模型进行了探索性分析:基线二维 U-Net、带有无齿卷积的 U-Net 变体以及带有自定义层的 U-Net,自定义层的特点是位置导向、部分共享加权方案内核。这些模型都经过了训练,并与最先进的基准 3D U-Net 模型进行了比较。总体而言,我们采用 VGG19 编码器架构的 U-Net 在所有其他模型中取得了最佳性能得分,平均 Dice 得分为 80.48%,IoU 得分为 72.93%。分割结果还与任意分割模型(SAM)和 UniverSeg 模型进行了比较。研究结果表明,与最先进的三维 U-Net 模型相比,我们的二维 U-Net 模型在假腔和真腔分割准确率方面表现出色,而假腔血栓分割准确率较低。研究结果凸显了开发分割模型(尤其是心血管医学图像)的复杂性,并强调了开发轻量级模型用于实时决策以改善整体患者护理的重要性。
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来源期刊
CiteScore
10.70
自引率
3.50%
发文量
71
审稿时长
26 days
期刊介绍: The purpose of the journal Computerized Medical Imaging and Graphics is to act as a source for the exchange of research results concerning algorithmic advances, development, and application of digital imaging in disease detection, diagnosis, intervention, prevention, precision medicine, and population health. Included in the journal will be articles on novel computerized imaging or visualization techniques, including artificial intelligence and machine learning, augmented reality for surgical planning and guidance, big biomedical data visualization, computer-aided diagnosis, computerized-robotic surgery, image-guided therapy, imaging scanning and reconstruction, mobile and tele-imaging, radiomics, and imaging integration and modeling with other information relevant to digital health. The types of biomedical imaging include: magnetic resonance, computed tomography, ultrasound, nuclear medicine, X-ray, microwave, optical and multi-photon microscopy, video and sensory imaging, and the convergence of biomedical images with other non-imaging datasets.
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