Rapid Identification of Ancient Leather Species Using an Enzyme-Linked Immunosorbent Assay Based on Proteomic and Evolutionary Analyses.

IF 3.8 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS Journal of Proteome Research Pub Date : 2024-11-25 DOI:10.1021/acs.jproteome.4c00661
Yuxin Huang, Zhijiang Wu, Hailiang Yang, Yanan Wang, Liping Bao, Yang Zhou, Huabing Wang
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Abstract

The species identification of leather artifacts is of great significance for studying the use and spread of ancient leathers; however, the absence of effective detection methods remains an obstacle. Here, we performed a shotgun proteomic analysis to identify the protein composition of ancient leather artifacts. Based on the Swiss-Prot database, 154 proteins were identified. We investigated these proteins using molecular evolution, structural domain, and sequence alignment analyses to select suitable proteins. Two proteins, Kelch-like family member 17 (KLHL17) and Nance-Horan Syndrome actin remodeling regulator (NHS), were selected for antibody preparation. Their binding affinities were determined by antibody potency and surface plasmon resonance (SPR). Furthermore, we developed and optimized an enzyme-linked immunosorbent assay (ELISA) suitable for the species identification of ancient leather artifacts. Two antibodies specifically identified the species of leather samples from goats and cattle, respectively. We established a new method with the advantages of portability, cost-effectiveness, and high sensitivity that was applied to leather species identification. Our study provides an effective detection tool for archeological leather artifacts utilizing the classical proteomics approach and ELISA technique. In addition, this study provides insights into the development of new protein-based methods for the identification of cultural relics.

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基于蛋白质组和进化分析的酶联免疫吸附测定法快速鉴定古皮革物种
皮革文物的物种鉴定对于研究古代皮革的使用和传播具有重要意义;然而,缺乏有效的检测方法仍然是一个障碍。在此,我们进行了霰弹枪蛋白质组分析,以鉴定古代皮革制品的蛋白质组成。基于 Swiss-Prot 数据库,我们鉴定出了 154 种蛋白质。我们利用分子进化、结构域和序列比对分析对这些蛋白质进行了研究,以筛选出合适的蛋白质。我们选择了两个蛋白质,即 Kelch 样家族成员 17(KLHL17)和 Nance-Horan 综合征肌动蛋白重塑调节因子(NHS),用于制备抗体。通过抗体效价和表面等离子体共振(SPR)测定了它们的结合亲和力。此外,我们还开发并优化了一种酶联免疫吸附试验(ELISA),适用于古代皮革制品的物种鉴定。两种抗体分别对山羊和牛皮革样品的物种进行了特异性鉴定。我们建立了一种新方法,具有便携、经济、灵敏度高等优点,可用于皮革物种鉴定。我们的研究利用经典的蛋白质组学方法和 ELISA 技术为考古皮革文物提供了一种有效的检测工具。此外,这项研究还为开发基于蛋白质的文物鉴定新方法提供了启示。
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来源期刊
Journal of Proteome Research
Journal of Proteome Research 生物-生化研究方法
CiteScore
9.00
自引率
4.50%
发文量
251
审稿时长
3 months
期刊介绍: Journal of Proteome Research publishes content encompassing all aspects of global protein analysis and function, including the dynamic aspects of genomics, spatio-temporal proteomics, metabonomics and metabolomics, clinical and agricultural proteomics, as well as advances in methodology including bioinformatics. The theme and emphasis is on a multidisciplinary approach to the life sciences through the synergy between the different types of "omics".
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