Efficient Search Algorithms for Identifying Synergistic Associations in High-Dimensional Datasets.

IF 2.1 3区 物理与天体物理 Q2 PHYSICS, MULTIDISCIPLINARY Entropy Pub Date : 2024-11-11 DOI:10.3390/e26110968
Cillian Hourican, Jie Li, Pashupati P Mishra, Terho Lehtimäki, Binisha H Mishra, Mika Kähönen, Olli T Raitakari, Reijo Laaksonen, Liisa Keltikangas-Järvinen, Markus Juonala, Rick Quax
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Abstract

In recent years, there has been a notably increased interest in the study of multivariate interactions and emergent higher-order dependencies. This is particularly evident in the context of identifying synergistic sets, which are defined as combinations of elements whose joint interactions result in the emergence of information that is not present in any individual subset of those elements. The scalability of frameworks such as partial information decomposition (PID) and those based on multivariate extensions of mutual information, such as O-information, is limited by combinational explosion in the number of sets that must be assessed. In order to address these challenges, we propose a novel approach that utilises stochastic search strategies in order to identify synergistic triplets within datasets. Furthermore, the methodology is extensible to larger sets and various synergy measures. By employing stochastic search, our approach circumvents the constraints of exhaustive enumeration, offering a scalable and efficient means to uncover intricate dependencies. The flexibility of our method is illustrated through its application to two epidemiological datasets: The Young Finns Study and the UK Biobank Nuclear Magnetic Resonance (NMR) data. Additionally, we present a heuristic for reducing the number of synergistic sets to analyse in large datasets by excluding sets with overlapping information. We also illustrate the risks of performing a feature selection before assessing synergistic information in the system.

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在高维数据集中识别协同关联的高效搜索算法
近年来,人们对多元相互作用和新出现的高阶依赖关系的研究兴趣明显增加。这一点在识别协同集的背景下尤为明显,协同集被定义为元素的组合,这些元素的联合互动导致了信息的出现,而这些信息是这些元素的任何单独子集所不具备的。部分信息分解(PID)等框架和基于互信息多变量扩展(如 O-信息)的框架的可扩展性受到必须评估的集合数量组合爆炸的限制。为了应对这些挑战,我们提出了一种新方法,利用随机搜索策略来识别数据集中的协同三元组。此外,该方法还可扩展到更大的数据集和各种协同度量。通过采用随机搜索,我们的方法规避了穷举法的限制,为揭示错综复杂的依赖关系提供了一种可扩展的高效方法。通过将我们的方法应用于两个流行病学数据集,说明了该方法的灵活性:芬兰青年研究和英国生物库核磁共振(NMR)数据。此外,我们还提出了一种启发式方法,通过排除信息重叠的数据集来减少大型数据集中需要分析的协同数据集的数量。我们还说明了在评估系统中的协同信息之前进行特征选择的风险。
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来源期刊
Entropy
Entropy PHYSICS, MULTIDISCIPLINARY-
CiteScore
4.90
自引率
11.10%
发文量
1580
审稿时长
21.05 days
期刊介绍: Entropy (ISSN 1099-4300), an international and interdisciplinary journal of entropy and information studies, publishes reviews, regular research papers and short notes. Our aim is to encourage scientists to publish as much as possible their theoretical and experimental details. There is no restriction on the length of the papers. If there are computation and the experiment, the details must be provided so that the results can be reproduced.
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