Physiochemical properties optimization of synthetic bio-destructible 2,6-bisarylidene-4-(t.-butyl)cyclohexanones to select a potential anti-cancer drug contender
{"title":"Physiochemical properties optimization of synthetic bio-destructible 2,6-bisarylidene-4-(t.-butyl)cyclohexanones to select a potential anti-cancer drug contender","authors":"Janarthanan Sekar, Meenambigai Ganesan, Kavitha Manivel, Pazhamalai Srinivasan","doi":"10.1016/j.molstruc.2024.140836","DOIUrl":null,"url":null,"abstract":"<div><div>A series of 2,6-bisarylidene-4-(t.-butyl)cyclohexanones <strong>5(a-h</strong>) have been synthesised using Claisen–Schmit condensation and the resultant analogy were characterized by FT-IR, <sup>1</sup>H NMR, and <sup>13</sup>C NMR spectral techniques. The crystal structure of the three synthesised organic compounds <strong>5a, 5b</strong> and <strong>5c</strong> have been determined using X-ray diffraction (XRD) analysis. A quantitative investigation of intermolecular interactions was conducted using two-dimensional fingerprint plots and three-dimensional Hirshfeld surface (3D-HS) analysis and the estimated interaction energies and energy frames were discussed. Utilizing the density functional theory (DFT) the quantum phenomena of synthesized compounds were calculated and investigation on prohibited energy gap by computing frontier molecular orbitals, namely HOMO-LUMO, was also recorded. The physiochemical and pharmacokinetic features of the synthesised compounds <strong>5(a-h)</strong> were computed and analyzed using the SwissADME online application. Synthesized compounds were screened by docking investigations utilizing the PDB codes 3ert, 1smd, 1smd, 1htb, 1drf, 3nby, 4tzk and 6fe2. the results confirmed that all the drug candidates selected found to enhance the binding affinities against each of those mentioned proteins. Furthermore, the anti-breast cancer potential of the drug candidates has been evaluated based on the docking results. Comparable results have been obtained for the produced compounds against the regular drugs, the former demonstrated a fair efficacy against breast cancer.</div></div>","PeriodicalId":16414,"journal":{"name":"Journal of Molecular Structure","volume":"1324 ","pages":"Article 140836"},"PeriodicalIF":4.0000,"publicationDate":"2024-11-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Molecular Structure","FirstCategoryId":"92","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0022286024033441","RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CHEMISTRY, PHYSICAL","Score":null,"Total":0}
引用次数: 0
Abstract
A series of 2,6-bisarylidene-4-(t.-butyl)cyclohexanones 5(a-h) have been synthesised using Claisen–Schmit condensation and the resultant analogy were characterized by FT-IR, 1H NMR, and 13C NMR spectral techniques. The crystal structure of the three synthesised organic compounds 5a, 5b and 5c have been determined using X-ray diffraction (XRD) analysis. A quantitative investigation of intermolecular interactions was conducted using two-dimensional fingerprint plots and three-dimensional Hirshfeld surface (3D-HS) analysis and the estimated interaction energies and energy frames were discussed. Utilizing the density functional theory (DFT) the quantum phenomena of synthesized compounds were calculated and investigation on prohibited energy gap by computing frontier molecular orbitals, namely HOMO-LUMO, was also recorded. The physiochemical and pharmacokinetic features of the synthesised compounds 5(a-h) were computed and analyzed using the SwissADME online application. Synthesized compounds were screened by docking investigations utilizing the PDB codes 3ert, 1smd, 1smd, 1htb, 1drf, 3nby, 4tzk and 6fe2. the results confirmed that all the drug candidates selected found to enhance the binding affinities against each of those mentioned proteins. Furthermore, the anti-breast cancer potential of the drug candidates has been evaluated based on the docking results. Comparable results have been obtained for the produced compounds against the regular drugs, the former demonstrated a fair efficacy against breast cancer.
期刊介绍:
The Journal of Molecular Structure is dedicated to the publication of full-length articles and review papers, providing important new structural information on all types of chemical species including:
• Stable and unstable molecules in all types of environments (vapour, molecular beam, liquid, solution, liquid crystal, solid state, matrix-isolated, surface-absorbed etc.)
• Chemical intermediates
• Molecules in excited states
• Biological molecules
• Polymers.
The methods used may include any combination of spectroscopic and non-spectroscopic techniques, for example:
• Infrared spectroscopy (mid, far, near)
• Raman spectroscopy and non-linear Raman methods (CARS, etc.)
• Electronic absorption spectroscopy
• Optical rotatory dispersion and circular dichroism
• Fluorescence and phosphorescence techniques
• Electron spectroscopies (PES, XPS), EXAFS, etc.
• Microwave spectroscopy
• Electron diffraction
• NMR and ESR spectroscopies
• Mössbauer spectroscopy
• X-ray crystallography
• Charge Density Analyses
• Computational Studies (supplementing experimental methods)
We encourage publications combining theoretical and experimental approaches. The structural insights gained by the studies should be correlated with the properties, activity and/ or reactivity of the molecule under investigation and the relevance of this molecule and its implications should be discussed.