Unraveling the mechanisms underlying diabetic cataracts: insights from Mendelian randomization analysis.

IF 5.2 2区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Redox Report Pub Date : 2024-12-01 Epub Date: 2024-12-05 DOI:10.1080/13510002.2024.2420563
Wenlan Liu, Yiming Pan
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Abstract

Background: Diabetic cataract (DC) is a major cause of blindness, with its pathogenesis involving oxidative stress and ferroptosis, according to recent studies.

Methods: We performed a Mendelian Randomization (MR) study using GWAS data to select SNPs and assess the causal link between diabetes and cataracts. DC datasets were analyzed for differential gene expression, WGCNA, and protein-protein interactions to identify key oxidative stress and ferroptosis genes. An SVM-RFE algorithm developed a diagnostic model, and ImmuCellAI analyzed immune infiltration patterns.

Results: MR analysis confirmed diabetes as a cataract risk factor and identified core genes related to oxidative stress and ferroptosis in DC. Four key genes (Hspa5/Nfe2l2/Atf3/Stat3) linked to both processes were discovered. Immune infiltration analysis revealed an imbalance associated with these genes.

Conclusions: A functional interaction between oxidative stress and ferroptosis genes in DC is suggested, with a 4-gene model, indicating their potential as a 'bridge' in DC pathogenesis.

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揭示糖尿病性白内障的机制:来自孟德尔随机化分析的见解。
背景:最近的研究表明,糖尿病性白内障(DC)是致盲的主要原因,其发病机制涉及氧化应激和铁下垂。方法:我们使用GWAS数据进行孟德尔随机化(MR)研究,以选择snp并评估糖尿病和白内障之间的因果关系。分析DC数据集的差异基因表达、WGCNA和蛋白-蛋白相互作用,以确定关键的氧化应激和铁死亡基因。SVM-RFE算法建立诊断模型,ImmuCellAI分析免疫浸润模式。结果:磁共振分析证实糖尿病是白内障的危险因素,并确定了氧化应激和铁下垂相关的核心基因。发现了与这两个过程相关的四个关键基因(Hspa5/Nfe2l2/Atf3/Stat3)。免疫浸润分析揭示了与这些基因相关的失衡。结论:氧化应激和铁下垂基因在DC中存在功能相互作用,并建立了一个4基因模型,表明它们可能是DC发病过程中的“桥梁”。
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来源期刊
Redox Report
Redox Report 生物-生化与分子生物学
CiteScore
6.10
自引率
0.00%
发文量
28
审稿时长
>12 weeks
期刊介绍: Redox Report is a multidisciplinary peer-reviewed open access journal focusing on the role of free radicals, oxidative stress, activated oxygen, perioxidative and redox processes, primarily in the human environment and human pathology. Relevant papers on the animal and plant environment, biology and pathology will also be included. While emphasis is placed upon methodological and intellectual advances underpinned by new data, the journal offers scope for review, hypotheses, critiques and other forms of discussion.
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